| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_1355 |
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| Symbol | |
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| ID | 3720880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | - |
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| Start bp | 3126043 |
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| End bp | 3128067 |
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| Gene Length | 2025 bp |
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| Protein Length | 674 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640072582 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_354436 |
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| Protein GI | 77464932 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.186022 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCGGG CGCGGTGGCT GTTCGCGGCG GCGGCGGGGC TGTTCCTCGC CGCCGCCGCC
CGCGACGGGG TCGAGGGCTT CATCGCCGCG ACAGCGATGC CGCCTCTGGC GCTGCAGACC
TCGGTCGAGG TCGAGGCGCG CGACGGCACG CTGCTGCGCG CCTATACCGT CGCCGACGGC
CGCTGGCGGC TGGAGCCGGG GCCGGTCGAT CCGCTGTTCC TGAAGATGCT CGTGGCCTAC
GAGGACGGCC GCTTCTACGA CCACGGCGGC ATCGATCCGC TGGCGCTGAC GCGGGCGGTG
CTGCAGGCGC TGCGCTACGG GCAGGTGGTA TCGGGCGGCT CGACCCTCAC CATGCAGGTC
GCGCGGCTCC TCGAAGAAAG CGGCACGGGC CGGGTGGCGG GCAAGCTGCG CCAGATGCGG
GTGGCGCTGG CGCTGGAGCG GCGGCTTTCG AAGGAGGAGA TCCTGTCGCT CTACCTCCGT
CTGGCGCCCT ATGGCGGCAA CCTCGAGGGG ATCCGGGCGG CGTCGATCTC CTACCTCGGC
AAGGAGCCCG CCCGGCTGAC CGCGGCCGAG GCGGCGCTTC TGGTCGCCAT CCCGCAATCG
CCCGAGGGAC GGCGGCCCGA CCGCCACCCC GAGCGGGCCG AGGCCGCGCG GGCCCGCGTC
CTCGCCCGCG CCGTCCGGGC GGAGGTGATC GAGTCCGACC GCGCCGAGGC TGCCCTGCGG
GAGCCGGTGC CGCGGGCGCG CAAGCCCTTC CCCGCTGTGG CACCGCATCT GGCCGACCGG
GTGGCGAAGG CCGATCCGCT GCGCCAGACG CACCGGCTGA CGCTCGACGC GGCCCTGCAG
AAACGGCTCG AGGCGCTGGC CGCCGAGACG GTCGAGGCGC GGGGCGAGCG GCTTCAGGTG
GCGATGCTGG TGGCCGATCA CCGCTCGGGC GAGATCCTGG CCTCGGTCGG ATCGGCGGCC
TATCGCGCCG ACCGGCGGCA GGGGTTCCTC GACATGACGG TGGCGCTGCG CAGCCCGGGC
TCGCTTCTCA AGCCCCTGAT CTACGGGCTT GCCTTCGACG AGGGGCTCGC CCATCCCGAG
ACGCTGCTCG ACGACCGGCC GATGGATTTC GCGGGCTACC GGCCGCAGAA CTTCGACCGG
ATCTTCCGCG GCGAGATCCG CGCGCGCGAG GCGTTGCAGA TGTCGCTGAA CCTGCCCGCA
GTCGCGCTGA CCGATGCGCT GGGGCCGGCG CGGCTTCTGT CCGCGCTGGA GCAGGCGGGG
GTGAAGCCGG TGCTGCCGGG CGGGCAGCCG GGCCTCGCCG TGGCGCTGGG AGGCGTGGGC
GTCACGCTCT CCGACATGGT CCAGCTCTAT GCGGCGCTCG CCCGCGGCGG GGTGGTGCTG
CCGCTCCATG TCGAGGGCGA GGGCGCGCCG GGGCGGCGGC TGATGTCCGA GGTTTCGGCC
TGGCAGGTGG CGGACATCCT GTCGGGCATG GCGCCGCCGC CCGGCGCGCC GGCGAACCGG
CTGGCCTACA AGACCGGCAC CAGCTACGGC CACCGCGACG CCTGGGCGGT GGGGTTCGAC
GGACAGCATG TGGTGGGGAT CTGGCTCGGG CGGGCCGACG GCACCCCGGT GCCGGGGGTC
TTCGGCGCCG ATCTCGCGGC GCCGGTGCTG TTCCGCACCT TCGCCCGGCT GAAGCCCGCG
CTGGATCCGC TGCCGCCCCC GCCGCGCGCG GCCCTGACCG TGAGCAATGC CGAGCTGCCG
CAGCCGCTCC GCCGGTTCCG CTCGCGGCTG GCGGCCTTCC AGACCGTGGG CGGGCCGCAG
GTGGCCTTCC CGCCCGACGG GGCCGAGGTC GAGCGGCTGC GCGGCGGGCT GAAGGTGAAG
GTCGAGGGCG GGACCGCCCC CTTCACCTGG CTCGCGAACG GGGCGCCGGT CGCGGTCTCG
CTCGGCGGGC GCGAGACGCT GCTCGACCTG CCGGCGGGGT TCCTCACCCT TTCGGTGATC
GACGCGGACG GCCGCTCTGC CCGGACCGCG GTGCGACTGC GCTAG
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| Protein sequence | MIRARWLFAA AAGLFLAAAA RDGVEGFIAA TAMPPLALQT SVEVEARDGT LLRAYTVADG
RWRLEPGPVD PLFLKMLVAY EDGRFYDHGG IDPLALTRAV LQALRYGQVV SGGSTLTMQV
ARLLEESGTG RVAGKLRQMR VALALERRLS KEEILSLYLR LAPYGGNLEG IRAASISYLG
KEPARLTAAE AALLVAIPQS PEGRRPDRHP ERAEAARARV LARAVRAEVI ESDRAEAALR
EPVPRARKPF PAVAPHLADR VAKADPLRQT HRLTLDAALQ KRLEALAAET VEARGERLQV
AMLVADHRSG EILASVGSAA YRADRRQGFL DMTVALRSPG SLLKPLIYGL AFDEGLAHPE
TLLDDRPMDF AGYRPQNFDR IFRGEIRARE ALQMSLNLPA VALTDALGPA RLLSALEQAG
VKPVLPGGQP GLAVALGGVG VTLSDMVQLY AALARGGVVL PLHVEGEGAP GRRLMSEVSA
WQVADILSGM APPPGAPANR LAYKTGTSYG HRDAWAVGFD GQHVVGIWLG RADGTPVPGV
FGADLAAPVL FRTFARLKPA LDPLPPPPRA ALTVSNAELP QPLRRFRSRL AAFQTVGGPQ
VAFPPDGAEV ERLRGGLKVK VEGGTAPFTW LANGAPVAVS LGGRETLLDL PAGFLTLSVI
DADGRSARTA VRLR
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