| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_1351 |
|---|
| Symbol | serC |
|---|
| ID | 3720876 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | + |
|---|
| Start bp | 3121118 |
|---|
| End bp | 3122275 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640072578 |
|---|
| Product | phosphoserine aminotransferase |
|---|
| Protein accession | YP_354432 |
|---|
| Protein GI | 77464928 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1932] Phosphoserine aminotransferase |
|---|
| TIGRFAM ID | [TIGR01365] phosphoserine aminotransferase, Methanosarcina type
[TIGR01366] phosphoserine aminotransferase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGATC TGCAGACCCC GGCCGCGCGG CCGGCCAATC CGCGCTTCTC TTCCGGCCCC
TGTGCCAAGA TTCCCGCCTA TTCGCTGGAC CTTCTGTCGG ACGCGCCGCT GGGCCGCTCG
CACCGTGCCG CCGTCGGCAA GGCCAAGCTG AAAGAGGCGA TCGACCTCAC CCGCGAGATC
CTCGGCGTGC CGGAAGGCTA CCGCATCGGC ATCGTCCCCG GTTCGGATAC CGGCGCGGTC
GAGATGGCGA TGTGGTCGCT GCTGGGCGCG CGCCCCGTCG AGATGCTGGC CTGGGAAAGC
TTCGGCGAAG GCTGGGTCAC CGACGCGGTG AAGCAGCTGA AGCTGGATGC GACCGTGCGC
AAGGCGGCCT ATGGCGAGAT CGTCGATCTG GCGCAGGTCG ATTTCACCCG CGACGTGGTC
TTCACCTGGA ACGGCACCAC CAGCGGAGTG CGCCTGCCCA ACGGCGATGC GATCCCGGCC
GACCGCGAAG GTCTCACCAT CTGCGACGCG ACCTCGGCGG CCTTCGCCAT GGACCTGCCC
TGGGACAAGC TCGATGTCGT GACCTTCTCC TGGCAGAAGG TGCTGGGCGG CGAGGGCGGC
CACGGGATGC TGATCCTCAG CCCCCGCGCG GTCGAGCGGC TGGAAAGCTA TACGCCCGCC
TGGCCGATGC CGAAGATCTT CCGCATGACC AAGGGCGGCA AGCTGATCGA GGGCATCTTC
CAGGGCGAGA CGATCAACAC GCCCTCGATG CTCGCGGTCG AGGATTACCT CGTCTCGCTT
AAGTGGGCGC AACGGATCGG CGGGCTCAAG GCGCTGGTCG CCCGCGCGGA AGCGAACTCG
AAGGTCGTGG CCGATTTCGT CGCGGCGCAT GACTGGATCG CGAACCTCGC CGTCGATCCC
GCGACCGCCT CGACCACCTC GGTCTGCCTG AAGTTCACCG ATCCGCGCAT CGCGGACGGT
GCGGCCTTCG CCAAGGCGGT GGCCAAGCGG CTCGAGAAGG AGGGCGTGGC CCTCGACGTC
GGCGCCTATC GCGATGCGCC CGCGGGCCTC AGGATCTGGT GCGGCTCGAC CGTCGAGACG
GCCGATGTTG CGGCGCTGAT GCCCTGGATC GAATGGGCCT TCGAGGCCGA GATCGCGGCG
CTCGCCAAGG CCGCCTGA
|
|---|
| Protein sequence | MSDLQTPAAR PANPRFSSGP CAKIPAYSLD LLSDAPLGRS HRAAVGKAKL KEAIDLTREI
LGVPEGYRIG IVPGSDTGAV EMAMWSLLGA RPVEMLAWES FGEGWVTDAV KQLKLDATVR
KAAYGEIVDL AQVDFTRDVV FTWNGTTSGV RLPNGDAIPA DREGLTICDA TSAAFAMDLP
WDKLDVVTFS WQKVLGGEGG HGMLILSPRA VERLESYTPA WPMPKIFRMT KGGKLIEGIF
QGETINTPSM LAVEDYLVSL KWAQRIGGLK ALVARAEANS KVVADFVAAH DWIANLAVDP
ATASTTSVCL KFTDPRIADG AAFAKAVAKR LEKEGVALDV GAYRDAPAGL RIWCGSTVET
ADVAALMPWI EWAFEAEIAA LAKAA
|
|---|
| |