| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_1321 |
|---|
| Symbol | fliR |
|---|
| ID | 3720923 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | + |
|---|
| Start bp | 3094075 |
|---|
| End bp | 3094857 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640072548 |
|---|
| Product | flagellar biosynthesis pathway, component FliR |
|---|
| Protein accession | YP_354402 |
|---|
| Protein GI | 77464898 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
|---|
| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGC TTTTCGAACG GCTCGCAGAA CTCGTCCTGT TGGCGCAGGA TCTGTTCCGC
GGAGGCTTCC TTGTCTTCCT GAGGGTAGGA GCCGCCATGG CGCTCCTGCC GGCGTTTGGC
GAGACGAGCC TGCCCGTCCG GGTGCGGCTC GCCGCCGCCT TGGCCTTCAC TGCGATCGTC
TTTCCGGCGG TCAGCGACCG CGTCCCCACT TATGACAGCA CCGTCGCCCC TCTTCTGACG
GAGACAGCGG TGGGGCTGCT TCTCGGCGCT TCGCTCCGGC TCTTCGTCCT CGCGCTTCAG
ACAGCGGGAA CCATTGCAGC GCAGGCGACG TCGCTGGCGC AGCTTTTCGG ATCGACTGCG
GGAGAACCCC AGCCCGTCAT GACTAATATT CTGACGCTTG CGGGACTGGC CCTCGCAGTG
GCGGGCGGAC TGCATGTGCA GATCGCCCTG TTCCTCATCC AGTCCTACGA TATCCTGCCT
GCAGCCCGGT TGCCTGAACC TGCGGACGTC GCGACCTGGG GCCTTGCGCT GGTGGTGAAG
AGTTTCGCCC TCGGCTTCCT GCTCGCGATG CCCTTCGTTG CGGCCTCCTT CATCTTCAAC
GTGGCCCTCG GGATCGTCAA TCGTGCCATG CCGCAGCTCA TGGTCTTCTT CGTCGGAGCG
CCTGCACTGA CCTTCGGTGG CCTCGTCCTC CTGGCGCTTG CGGCGCCGGC CGTGCTGGGC
ATCTGGCTGG TGGATCTGCG TACTTTTCTC GAGGCGCCGT TCATGGGAGC GGGATCTCCA
TGA
|
|---|
| Protein sequence | MSTLFERLAE LVLLAQDLFR GGFLVFLRVG AAMALLPAFG ETSLPVRVRL AAALAFTAIV
FPAVSDRVPT YDSTVAPLLT ETAVGLLLGA SLRLFVLALQ TAGTIAAQAT SLAQLFGSTA
GEPQPVMTNI LTLAGLALAV AGGLHVQIAL FLIQSYDILP AARLPEPADV ATWGLALVVK
SFALGFLLAM PFVAASFIFN VALGIVNRAM PQLMVFFVGA PALTFGGLVL LALAAPAVLG
IWLVDLRTFL EAPFMGAGSP
|
|---|
| |