| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_1312 |
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| Symbol | fliF |
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| ID | 3720973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | - |
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| Start bp | 3085015 |
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| End bp | 3086544 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640072540 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_354394 |
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| Protein GI | 255985845 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0364149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGCGCGA CGGTTGCCAT GTTCCTGGCC GTGCTCGGTC TGTCGCAGCT CGCCGGCCGG
CCGCCGATGG CGCTGCTCTA TGCCGGTCTG CAGGGACCGG CGGCGGGCGA AGTCGTGACC
GCGCTCGAGG CGCAGGGCGC GGCCTACGAG GTGAGGGGCG ATTCGGTCTA TGTCGAGGCG
GCCCGCCGGG ACGAGATCCG CATGAAACTC GCGGGCGAGG GGCTGCCCGC CACGGGCGCC
GCGGGTTACG AACTCCTCGA CGGACTCTCG GGCTTCGGCA CCACGTCGCA GATGTTCGAC
GCGGCCTATC TGCGCGCGAA GGAGGGCGAA CTTGCCCGGA CGATCCTCGC CAGCCCGCAG
GTCAAGGCGG CACGGGTGCA TATCGCGCAG CCGGCGGCCC AGCCGTTCCG GCGGGAGCAG
CGGCCGACGG CGAGCGTCAC GGTGACCACA TCGGGCGGCG CGGTGACCGC GGATCAGGCG
CGGGCCTTCA AACATCTGGT GGCCTCGGCC GTGGCCGGGC TGCAGCCCGA AGACGTGTCG
GTGATCGACA GCGTGATGGG CCTGATCCGG TCCGGGGACG AGAAGGACGG CGCCACCGCC
GCGGGCGAGA GCCGCGCCGC CGAACTCCGG AGCAACGTCG AGCGGCTGCT CGAGGCGCGG
GTCGGGCCGG GCCGGGCTGT GGTCGAAGTC AGCGTCGATG TCGAGACCGC GCGCGAGTCG
ATCGTGGAGA AGAGCTTCGA CCCCAAGGGC CGCGTGCCGA TCTCGTCGGA AACCCAGGAG
AAATCCAGCA ACTCGACCGA ACCCTCGCCC GACGTGACGG TGGCGTCGAA CCTGCCGGAA
GGCGACGCGA AGGGAGGCAC GGGCGGCAAG TCGAGCACCA GCGAAACTCG CGAGATGGTC
AATTTCGAGG TCTCCCAGAC CCAGCGCGAA CTCATGCGCC AGCCGGGTGC CATCCGGCGG
CTCACGGTTG CCGTTCTGGT CGATGGGATC AAGACGGTTG CGGACGATGG CACCGTGGGC
TGGGAACCGC GCCCCGAGGA GGAGCTTGCC GTCCTGCGCG AACTGGTCGG CTCAGCGGTG
GGGCTCGATG AATCGCGTGG CGACAGGCTG ACCTTGCGCT CGCTGGCCTT CGAGACGCCG
CCCGAAGCGG GAACCCTGGC CGAGACCGGC TTCCTCAGCC GCCTCGGCGC CTTCGACCTG
ATGAGCCTGA TCCAGATCGG CGTGCTCGCT CTGGTGGCCC TGATCCTCGG TCTCTTCGTC
GTCCGCCCGG TCCTGACGGC GCCGCCGCGC CCGCCGGCTG CCCCGCAGCC TCTGGCGCTC
CCGGGTTACG AGGGCGGCGA ACCGGCGCTG ACGGGCGAGA TCGACGATAG CGGCGATCTG
CCGGACTTCC CGATGGTGTC CTCCGCGCCT CTCGACCTCG ACGAGGAGGC GGATCCGGTC
GCGCGGCTCC GCCGTCTGAT CGAGGAGCGC CAGGCCGAGT CTGTCGAGAT CCTGCGCGGC
TGGATGGAAC CGCAGCGGGA GGCGCCGTGA
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| Protein sequence | MGATVAMFLA VLGLSQLAGR PPMALLYAGL QGPAAGEVVT ALEAQGAAYE VRGDSVYVEA
ARRDEIRMKL AGEGLPATGA AGYELLDGLS GFGTTSQMFD AAYLRAKEGE LARTILASPQ
VKAARVHIAQ PAAQPFRREQ RPTASVTVTT SGGAVTADQA RAFKHLVASA VAGLQPEDVS
VIDSVMGLIR SGDEKDGATA AGESRAAELR SNVERLLEAR VGPGRAVVEV SVDVETARES
IVEKSFDPKG RVPISSETQE KSSNSTEPSP DVTVASNLPE GDAKGGTGGK SSTSETREMV
NFEVSQTQRE LMRQPGAIRR LTVAVLVDGI KTVADDGTVG WEPRPEEELA VLRELVGSAV
GLDESRGDRL TLRSLAFETP PEAGTLAETG FLSRLGAFDL MSLIQIGVLA LVALILGLFV
VRPVLTAPPR PPAAPQPLAL PGYEGGEPAL TGEIDDSGDL PDFPMVSSAP LDLDEEADPV
ARLRRLIEER QAESVEILRG WMEPQREAP
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