Gene RSP_1290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_1290 
Symbol 
ID3718204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007493 
Strand
Start bp3056819 
End bp3057697 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content71% 
IMG OID640072517 
Productbranched chain amino acid ABC transporter inner membrane protein 
Protein accessionYP_354371 
Protein GI77464867 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTTCG GACCCTTCCT GCTTCTCGCC GTGATGGAGG GGCTGGTCGG CGCGGCGGTG 
CTCGCGCTGA CGGCTTCGGG GCTGAGCCTC GTCTTCGGCG TGCTGCGGGT GGTGAACGTG
GCCCATGGCG AGTTCTTCAT GCTGGGCGCG GTCACCGCAT GGTTCGTGAG CCAGTGGGTG
CCGGGCCCGC CCGCACTGGC CTTCGCCGTG GCGCTGGTGG CCTGCCCGCT GCTGGTGGCG
GGGCTTGCGG CCCTGGCCGA CCGGCTGGTG CTGAAGCGGC TCGCCTACGA GCCCGAGGCC
ACGATCATCG CGACGATCGG GCTTCTCTAC ATCCTGCAGC AGGCTGCCCT CACGCTCTAC
GGCCCCGAAG CGAGGCCGGT GCCGCCGCCG TTCGAGGCGC GGCTGCAGCT GCCGTGGTTC
GGCTGGTCGG GCTACAAGCT CTTCGTGATC GGCGCGGCGG GCGCGGTGCT GGCCGGCCTG
TGGCTGCTCC TCGCGCGGAG CCGGATCGGC CTCGTGATGC GCGCCACGCA GATCGACCGC
GAGACCGCCA GCGCCTTCGG CATCGATGTG GACCGGGTCT ATGCTGCAAC CTTCGCGCTC
GGCGCGGCGC TGGCGGCCAT CGCCGCCGTG CTGATCGTGC CGATCCAGCA GGCCCATTAC
CTGATGGGGG GCGATCCGCT CCTGCTGTCC TTCATCGTCG TGGTGATCGG AGGCTTGGGG
TCGCTCCGCG GCACGCTGGT GGCGGCCCTG CTGATCGGCG TGTCGGACGG CGTGATCTCG
ACCTTCTTCG AGCCGACGCT GGCCAAGATC CTGGCCACTC TCCTCGTGGC GCTGGTGCTG
GTCTTCCGCC CGCAGGGGCT GTTCGGAGCC CGCGCATGA
 
Protein sequence
MEFGPFLLLA VMEGLVGAAV LALTASGLSL VFGVLRVVNV AHGEFFMLGA VTAWFVSQWV 
PGPPALAFAV ALVACPLLVA GLAALADRLV LKRLAYEPEA TIIATIGLLY ILQQAALTLY
GPEARPVPPP FEARLQLPWF GWSGYKLFVI GAAGAVLAGL WLLLARSRIG LVMRATQIDR
ETASAFGIDV DRVYAATFAL GAALAAIAAV LIVPIQQAHY LMGGDPLLLS FIVVVIGGLG
SLRGTLVAAL LIGVSDGVIS TFFEPTLAKI LATLLVALVL VFRPQGLFGA RA