Gene RSP_1222 details

Gene Information

• Locus tag: RSP_1222
• Symbol: ham1
• ID: 3719670
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodobacter sphaeroides 2.4.1
• Kingdom: Bacteria
• Replicon accession: NC_007493
• Strand: +
• Start bp: 2994982
• End bp: 2995593
• Gene Length: 612 bp
• Protein Length: 203 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 640072450
• Product: putative deoxyribonucleotide triphosphate pyrophosphatase
• Protein accession: YP_354304
• Protein GI: 77464800
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0127] Xanthosine triphosphate pyrophosphatase
• TIGRFAM ID: [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.307033
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGCGGA AATTCTCGGG CGACCGCCTG CTCGTCGCCA CCCACAACAA GGGCAAGCTC 
GAAGAGATCC AGCATCTCTT CGAGCCTCTG GGCATCGAGG TCGTCTCGGC GGGAGAGCTG 
GGCCTGCCCG AGCCGGAAGA GACCGAAACC ACCTTCGCGG GCAATGCGCG CATCAAGGCC 
CATGCGGCGG CGAAGGCCGC CGACATGGTG GCGCTGGCCG ACGATTCCGG GATCACCATC 
GACGCGCTGG ACGGCGCGCC GGGCGTCTAT ACGGCCGACT GGGCCATGAC CCCCACGGGG 
CGGGACTTCG TGAAGGCCAT GACCGACACC TGGGCCAGGC TCGAAGCGGT GAACGCCCCC 
TTCCCGCGCC GCGCGCAGTT CCGCTGCACG CTGGTCCTCG CCTGGCCCGA CGGCCATGAC 
GAGGTCTTCG AAGGCGTGAT GCCGGGACAG GTCGTCTGGC CGATGCGGGG CCAGCAGGGC 
CACGGCTACG ACCCGATCTT CCAGCCCGAT GGCAGCGAGC TCACCTTCGG CGAGATGGAC 
CGCTGGGAGA AGAACGAGAT CAGCCACCGC GCCCGCGCCT TCCGCAACCT CATGCAGGGC 
TGTTTCAAAT GA 

 

Protein sequence

MTRKFSGDRL LVATHNKGKL EEIQHLFEPL GIEVVSAGEL GLPEPEETET TFAGNARIKA 
HAAAKAADMV ALADDSGITI DALDGAPGVY TADWAMTPTG RDFVKAMTDT WARLEAVNAP 
FPRRAQFRCT LVLAWPDGHD EVFEGVMPGQ VVWPMRGQQG HGYDPIFQPD GSELTFGEMD 
RWEKNEISHR ARAFRNLMQG CFK