| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_1180 |
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| Symbol | xylF |
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| ID | 3718173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | - |
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| Start bp | 2948588 |
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| End bp | 2949613 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640072411 |
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| Product | ABC sugar (xylose) transporter, periplasmic binding protein |
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| Protein accession | YP_354265 |
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| Protein GI | 77464761 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4213] ABC-type xylose transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02634] D-xylose ABC transporter, substrate-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAAGG CCCTTTTGGC CGCCGTGGTC GCCACGGCCG GCTTTTCCTC TGCCGCGCTC
GCCCAGGATC TGACGGTCGG CGTCAGCTGG TCGAACTTTC AGGAAGAACG CTGGAAGACC
GACGAGGCTG CGATCAAGGA GGCCCTCGAA GCGGCGGGCG CCACCTATGT CTCGGCCGAC
GCGCAATCCT CCTCGGCCAA GCAGTTGTCC GACGTCGAGG CCCTGATCTC GCAGGGCGTC
GATGCGCTCA TCATCCTGGC GCAGGATGCC GACGCCATCG GCCCGGCCGT GCAGGCGGCC
GCCGACGAGG GCATTCCGGT CGTAGCCTAT GACCGGCTGA TCGAGGACAA CCGCGCCTTC
TACCTGACCT TCGACAACGT CGAGGTGGGC CGCATGCAGG CCCGCGCCGT GTTCGAGCAG
GCGCCGAAGG GCAATTATGT CATGATCAAG GGCAATGCCG CCGACCCGAA CGCCGACTTC
CTGCGCGGCG GCCAGCAGGA GGTGCTGCAG AAGGCCATCG ACGCGGGCGA CATCACCATC
GTGGGCGAGG CCTATACCGA CAGCTGGCTG CCCGCCAACG CCCAGCGGAA CATGGAGCAG
ATCCTGACCG CCAACGACAA CAAGGTCGAT GCGGTCGTGG CCTCGAACGA CGGCACCGCG
GGCGGCGCCA TCGCCGCGCT GACGGCGCAG GGGATGCAGG GCATCCCGGT TTCGGGTCAG
GACGGCGACC ATGCGGCGCT GAACCGGATC GCCAAGGGCA CGCAGACCGT CTCGGTCTGG
AAGGACTCGC GCGAGCTGGG CAAGGCCGCC GCCGAGATCG CCGTGGCGAT GGCCAAGGGC
ACCGAGATGG AAGGCGTCGA GGGCGCCCAG AAATGGACCT CGCCCAAGGG CACCGAGATG
AACGCCGTGT TCCTCGAGCC CATCGCCATC ACCAAGGACA ACCTCTCGGT CGTCGTGGAT
GCGGGCTGGA TCGGGAAGGA CGCGCTCTGC CAGGGCGTCT CGAACGGCCC GGCCCCCTGC
AACTGA
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| Protein sequence | MHKALLAAVV ATAGFSSAAL AQDLTVGVSW SNFQEERWKT DEAAIKEALE AAGATYVSAD
AQSSSAKQLS DVEALISQGV DALIILAQDA DAIGPAVQAA ADEGIPVVAY DRLIEDNRAF
YLTFDNVEVG RMQARAVFEQ APKGNYVMIK GNAADPNADF LRGGQQEVLQ KAIDAGDITI
VGEAYTDSWL PANAQRNMEQ ILTANDNKVD AVVASNDGTA GGAIAALTAQ GMQGIPVSGQ
DGDHAALNRI AKGTQTVSVW KDSRELGKAA AEIAVAMAKG TEMEGVEGAQ KWTSPKGTEM
NAVFLEPIAI TKDNLSVVVD AGWIGKDALC QGVSNGPAPC N
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