| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_1176 |
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| Symbol | xylA |
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| ID | 3718169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | - |
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| Start bp | 2943689 |
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| End bp | 2944990 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640072407 |
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| Product | xylose isomerase |
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| Protein accession | YP_354261 |
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| Protein GI | 77464757 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2115] Xylose isomerase |
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| TIGRFAM ID | [TIGR02630] xylose isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0800628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACT TCTTCGCGGG TATCCCGCAG ATCCGCTACG AGGGCGAAGG CTCCTCCAAC
GAATTCGCCT TCCGCCACTA CAATCCCGAC GAGGTGATCC TCGGCAAGCG GATGGAAGAC
CATCTGCGCT TCGCGGTCGC CTGGTGGCAC AGCTTCGCCT GGCCGGGCGG CGATCCGTTC
GGCGGCCAGA CCTTCGACCG GCCGTGGTTC GGCGATACGC TGGACCTCGC AAAGCTCAAG
GCCGACGTGG CCTTCGAGAT GTTCGACATC CTCGGCGCGC CCTTCTTCTG CTTCCACGAT
GCCGACATCC GCCCGGAAGG CGCGACCTTC GCCGAAAGCA AGCGCAACCT CGAGGAGATC
GTCGACCATA TCGGCATCAG GATGGAAGGG TCGAAGACGA AGCTCCTCTG GGGCACGGCG
AACCTCTTCT CGCACCGCCG CTTCATGTCG GGCGCGGCCA CCAACCCCGA CCCCGACGTC
TTCGCCTGGT CGGCGGCCAC GGTGAAGGGC TGCATGGACG CGACGATGAA GCTCGGCGGC
GCGAACTATG TGCTCTGGGG CGGGCGCGAG GGCTACGAGA CGCTGCTCAA CACCGACCTC
ACCCGCGAGG CCGAGAATGC GGGCCGCTTC CTTCAGATGG TGGTGGATTA CAAGCACAAG
ATCGGTTTCC AGGGCACGAT CCTGATCGAG CCGAAGCCGC AGGAGCCCTC GAAGCACCAG
TACGACTATG ACGTGGCGAC GGTCTACGGC TTCCTCAAGC GTTTCGGCCT CGAGAAGGAG
GTGAAGCTCA ACATCGAGCA GGGCCACGCG ATCCTCGCCG GCCACAGTTT CGAGCACGAG
CTGGCGCTGG CGGCGAGCCT CGGCATCCTC GGCTCGATCG ACATGAACCG GAACGACTAT
CAGTCGGGCT GGGATACCGA TCAGTTCCCG CACAACCACC CCGAGATGGC CTTGGCCTAT
TACGAGATCC TGCGGGCGGG CGGCTTCACC ACGGGCGGCA CGAACTTCGA CGCGAAGATC
CGCCGCCAGA GCCTCGATCC CGAGGATCTC GTGCTGGCCC ATGTGGGTGG CATGGACACC
TGCGCCCGTG CGCTGAAGGC CGCGGCGCGG CTCTATGAGG ACGGAAGCCT CGAGACCGCG
CGCGCCGCGC GCTATGCGGG CTGGGAGACG CCCGAGGCGC AGGCGATGCT CGCCTCTTCG
CTGGAGAAGA TCGAGGCCCG CGTGCTGGCC GAGGGGATCA ACCCCGAGCC GCGCTCGGGC
CGGCAGGAGC GGCTGGAAAA CCTCTGGAAC CGCTTCGTCT GA
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| Protein sequence | MTDFFAGIPQ IRYEGEGSSN EFAFRHYNPD EVILGKRMED HLRFAVAWWH SFAWPGGDPF
GGQTFDRPWF GDTLDLAKLK ADVAFEMFDI LGAPFFCFHD ADIRPEGATF AESKRNLEEI
VDHIGIRMEG SKTKLLWGTA NLFSHRRFMS GAATNPDPDV FAWSAATVKG CMDATMKLGG
ANYVLWGGRE GYETLLNTDL TREAENAGRF LQMVVDYKHK IGFQGTILIE PKPQEPSKHQ
YDYDVATVYG FLKRFGLEKE VKLNIEQGHA ILAGHSFEHE LALAASLGIL GSIDMNRNDY
QSGWDTDQFP HNHPEMALAY YEILRAGGFT TGGTNFDAKI RRQSLDPEDL VLAHVGGMDT
CARALKAAAR LYEDGSLETA RAARYAGWET PEAQAMLASS LEKIEARVLA EGINPEPRSG
RQERLENLWN RFV
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