| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_1163 |
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| Symbol | nusA |
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| ID | 3718156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | + |
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| Start bp | 2925203 |
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| End bp | 2926810 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640072394 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_354248 |
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| Protein GI | 77464744 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.605286 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATCA CCTCTGCCAA CCAGCTTGAA CTGCTGCAAA CCGCCGAGGC GGTCGCGCGG
GAGAAGATGA TCGATCCCGA TCTGGTGATC CAGGCGATGG AAGAGAGCCT CGCGCGGGCC
GCCAAGTCGC GCTACGGCTC GGATCTCGAC ATCCGGGTGA AGATCGACCG CAAGACCGGC
CGCGCCACCT TCGCCCGCAT CCGCACCGTG GTCGAGGACG AGCTGATCGA GAATCACCAC
GCTCAGGTGA CGGTGAAGCA GGCGAGAAGC TATCTCGCGG ATCCCAAGAT CGGCGACGAG
ATCATCGACG AAGTGCCGCC GGTGGATCTC GGCCGGATCG CCGCGCAATC GGCCAAGCAG
GTCATCCTGC AGAAGGTGCG CGAGGCCGAG CGCGACCGTC AGTATGACGA GTTCAAGGAC
CGCAAGGGCA CGATCATCAA CGGCGTGGTC AAGCGCGAGG AATACGGCAA CATCATCGTC
GACATCGGCC GCGGCGAGGG CATCCTGCGC CGCAACGAGA AGATCGGCCG CGAGAGCTAC
CGTCCGAACG ACCGCATCCG CGCCTATATC AAGGACGTCC GCCGCGAGGC CCGTGGCCCG
CAGGTCTTCC TCAGCCGCAC CGATCCGCAG TTCATGGCCG AGCTCTTCAA GATGGAAGTG
CCGGAGATCT ACGACGGCAT CATCGAGATC AAGGCCGTGG CCCGCGACCC GGGCTCGCGC
GCGAAGATTG CGGTCATCTC CTACGACAAC TCGATCGACC CGGTCGGCGC CTGCGTCGGT
ATGCGCGGCA GCCGCGTGCA GGCCGTCGTG AACGAGCTGC AGGGCGAGAA GATCGACATC
ATCCCGTGGA ACCAGGATCA GGCCACGTTC CTCGTGAACG CGCTGCAGCC GGCCGAGGTC
TCCAAGGTCG TGATCGACGA GGAAGCCGGC AAGATCGAGG TGGTGGTGCC CGACGAGCAG
CTCTCGCTCG CCATCGGCCG CCGCGGCCAG AACGTGCGCC TCGCGAGCCA GCTGACGGCC
CTCGACATCG ACATCATGAC CGAAGCCGAC GAATCGGCTC GCCGCCAGGC CGAGTTCGCC
GAGCGGACGA ATCTCTTCAT GGAGACCCTT GATATCGACG AGATGATGGC CCAACTACTG
GTGTCCGAAG GGTTCACGAA CCTTGAGGAA GTCGCTTACG TCGATCCCGA GGAACTCCTT
TCGATCGATG GGTTCGACGA GGACACGGCC GCCGAGCTTC AGGCCCGCGC CCGCGACCAT
CTGGAAGAAG CCAACCGCAA GGCCCTGGAA TCCGCCCGCG CCCTCGGGCT CGAGGATTCC
CTCGCCGGTT TCGAAGGGCT GACCCCGCAG ATGCTCGAGG CGCTCGCGAA GGACGGCATC
AAGACGCTCG AAGACTTCGC CACCTGCGCG GACTGGGAGC TGGCCGGCGG CTGGACCACG
GTGAACGGGC AGCGGGTGAA GGACGAGGGC GTCCTCGAGA AGTTCGACGT GAGCCTCGAG
GAAGCGCAGC ATCTGGTGAT GACCGCACGC GTCATGCTGG GCTGGGTCGA TCCGACCGAA
CTCGCGCCGG AAGCCGAGGA AGAAGAAGAG ACGGAGGGCG AGGCCTGA
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| Protein sequence | MAITSANQLE LLQTAEAVAR EKMIDPDLVI QAMEESLARA AKSRYGSDLD IRVKIDRKTG
RATFARIRTV VEDELIENHH AQVTVKQARS YLADPKIGDE IIDEVPPVDL GRIAAQSAKQ
VILQKVREAE RDRQYDEFKD RKGTIINGVV KREEYGNIIV DIGRGEGILR RNEKIGRESY
RPNDRIRAYI KDVRREARGP QVFLSRTDPQ FMAELFKMEV PEIYDGIIEI KAVARDPGSR
AKIAVISYDN SIDPVGACVG MRGSRVQAVV NELQGEKIDI IPWNQDQATF LVNALQPAEV
SKVVIDEEAG KIEVVVPDEQ LSLAIGRRGQ NVRLASQLTA LDIDIMTEAD ESARRQAEFA
ERTNLFMETL DIDEMMAQLL VSEGFTNLEE VAYVDPEELL SIDGFDEDTA AELQARARDH
LEEANRKALE SARALGLEDS LAGFEGLTPQ MLEALAKDGI KTLEDFATCA DWELAGGWTT
VNGQRVKDEG VLEKFDVSLE EAQHLVMTAR VMLGWVDPTE LAPEAEEEEE TEGEA
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