Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_1119 |
Symbol | |
ID | 3720703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | + |
Start bp | 2880565 |
End bp | 2882286 |
Gene Length | 1722 bp |
Protein Length | 573 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640072350 |
Product | ABC protein exporter, fused ATPase and inner membrane subunits |
Protein accession | YP_354205 |
Protein GI | 77464701 |
COG category | [R] General function prediction only |
COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGACC CCGCCGAACC GGCCGGCCTC TACCGGCTCA TCCTGCGCGA GGCAGCTCTT GGGGCGGGGG CGGCAGCCTT TGTGGGCTTC TTCGTGAATC TCCTCCACCT CGCCTTGCCG CTCTATAATG CGCAGGTTTA CGACCGGGTG ATCGGCAGCG CCAATCTCGA CACGCTGGTG GCCCTCACAG GGCTGGTCGC GATCCTGCTC GTCTTCGGCG CGGTCCTCGA CGTGCTGCGG GCCCGGATCT TCGCGATCCT CGCGGCGCGG CTGGCCGGAC AGCTCGGCCA GCCCGTCTTC GTGGCAGCCG TCGAGACCGC GCTCCGTGGC GGCCCCACCG CTGCGGCCGA GGGGATGCGC GCCGTGGCCG ACCTCCGCAG CTTCCTCGCG GGCGGGGCCA TCGCGCTGCC GATCGACCTG ACCTTCACTC CGGTCCTCCT CTTGGTTCTC TTCGCCCTCG ATCCGGCCTA CGGCCTGATC GGTCTCGGCG GGGCCGCCGC TCTGGCCGGG ACGGGCATCG TGACGGAGAT CCTCGCCCGC CGCCCCGTGG CCAGCGCGCT CGCGGCGGGC GGCAGCGTGC AGGCCGAGAC CGCGACCGCC CTGCGCAGCG CCGAAGTCAT TGCGGCCATG GGAATGCTGC CAGACATCGC CCGGCGCTGG CGAAGGGCTC AGGCGCGGTC GCTCGCGGCC GCCGATCGCG GGCAGGCGCG GGCCAAGGCC CTGTCCTCGC TGGCGCGCTT CCTCCGCACC GCCATCCAGA TCGCCGTGAT CTGCACCGGC ACGACCCTTG TCGTCGATCA GGCCGCCACC ATCGGCACCA TCGTGGCGGC GATGGCGATC ATGTCCCGCC TGCTCCTGCC GTTCGAGCAT CTGATCGACG GCTGGCGGCA ATGGATGGAT GCGGCCGAGG CGCACGGTCA TCTGCGGCGC CTCCTGCGAG AAGGCGGCAG CCCCCGCTCG TCCCTGCCCG CGCCGGTCGG GCGCGCGCTG CTGGTGGCCG ACCGCGTCAC CTATATCCCT GCGGGCCAAG ACCTGCCCCT TCTGCGCAAC GTCTCGTTCC GCATCGAACC CGGCGAGCTC CTCGGCGTCA TCGGCCCGTC GGGCGCAGGC AAATCGACGC TCGCGCGGCT GACGGTCGGT CTCTGGCCGC CCAGCGCCGG CGGTCTTTTC CTCGACGGAC AAAGCACCTT TCTCCACGAA CGGACGAGCT TCGGACGGGC GGTGGGCTAT CTGCCGCAGG AGCCGCTTCT GCTCGACGGC AGCGTGCGCG ACAACATCGC GCGCTTCCGG GACGCGCCGA TGGACGAGGT GATCGCCGCC GCCCGGCAGG CCGGCGTGCA CGAGCTGATC GGCCGCCTTC CGAGGGGCTA CGGCACGCGG CTCGCCGATG CCGGCGCGCG GCTGAGCGGG GGACAGCGCC AGCGGATCGC GCTCGCCCGG GCCATCTTCG GCGACCCGCA GCTTCTCGTG CTCGATGAAC CGAATGCCAG CCTCGATGCG GAAGGCGAGG CCGCGCTGGT CTCGGCCGTC GAGCAGGCGC GGGCGCGCGG CGCGGCGGTG CTCGTGGTGG CGCAGCGGAT GTCGGTGCTG GCCAAGGCCG ACCGGCTGCT CGTGCTACGC GAAGGGGCCG TGACCCATTA CGGGCCTCGG GCAGAGGTGA TGGCCGCCAT CGGACCGCAA CGACGCCCCG CCCCGGTCCC GGTTGCGCAG GCGTGCTCAT GA
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Protein sequence | MADPAEPAGL YRLILREAAL GAGAAAFVGF FVNLLHLALP LYNAQVYDRV IGSANLDTLV ALTGLVAILL VFGAVLDVLR ARIFAILAAR LAGQLGQPVF VAAVETALRG GPTAAAEGMR AVADLRSFLA GGAIALPIDL TFTPVLLLVL FALDPAYGLI GLGGAAALAG TGIVTEILAR RPVASALAAG GSVQAETATA LRSAEVIAAM GMLPDIARRW RRAQARSLAA ADRGQARAKA LSSLARFLRT AIQIAVICTG TTLVVDQAAT IGTIVAAMAI MSRLLLPFEH LIDGWRQWMD AAEAHGHLRR LLREGGSPRS SLPAPVGRAL LVADRVTYIP AGQDLPLLRN VSFRIEPGEL LGVIGPSGAG KSTLARLTVG LWPPSAGGLF LDGQSTFLHE RTSFGRAVGY LPQEPLLLDG SVRDNIARFR DAPMDEVIAA ARQAGVHELI GRLPRGYGTR LADAGARLSG GQRQRIALAR AIFGDPQLLV LDEPNASLDA EGEAALVSAV EQARARGAAV LVVAQRMSVL AKADRLLVLR EGAVTHYGPR AEVMAAIGPQ RRPAPVPVAQ ACS
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