Gene RSP_1092 details

Gene Information

• Locus tag: RSP_1092
• Symbol: rpoE
• ID: 3720851
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodobacter sphaeroides 2.4.1
• Kingdom: Bacteria
• Replicon accession: NC_007493
• Strand: +
• Start bp: 2849604
• End bp: 2850149
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 640072324
• Product: RNA polymerase sigma factor RpoE
• Protein accession: YP_354179
• Protein GI: 77464675
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACGGACA AGAGTGACAG GACGGACTGG GTGGCGCTCA TGCGTGCGAT CCGGGATCAT 
CGGGACGAGG CGGCCTTCGC AGAGCTGTTC CAGCACTTTG CGCCGAAGGT GAAGGGCTTC 
CTGATGAAAT CCGGCAGCGT GGCCTCCCAG GCCGAGGAAT GTGCGCAGGA TGTGATGGCA 
ACGGTCTGGC AGAAGGCTCA TCTCTTCGAT CCCTCGCGGG CATCGGTCGC GACATGGATC 
TTCACGATTG CGCGGAACCG CCGGATCGAC GGCCTGCGCA AGGACCGCCA GCCCGAGCCC 
GAGGATCTCT TCTGGGGCCC CGACAGCGAG CCTGACCAGG CCGACGTCTA TGAGATGCAG 
CAGGAGAACG CCCGCCTGGG CCGCGCCATC GCCCGCCTGC CCGAGGCGCA GCGGGCCCTG 
ATCGAGCGGG CCTTCTTCGG CGACCTCACC CACCGGGAAC TCGCGGCCGA GACCGGACTT 
CCCCTCGGAA CCATCAAGTC GCGGATCCGG CTCGCGCTGG ACCGTCTGCG CCAGCATATG 
AGTTGA 

 

Protein sequence

MTDKSDRTDW VALMRAIRDH RDEAAFAELF QHFAPKVKGF LMKSGSVASQ AEECAQDVMA 
TVWQKAHLFD PSRASVATWI FTIARNRRID GLRKDRQPEP EDLFWGPDSE PDQADVYEMQ 
QENARLGRAI ARLPEAQRAL IERAFFGDLT HRELAAETGL PLGTIKSRIR LALDRLRQHM 
S