Gene RSP_1064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_1064 
Symbol 
ID3720917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007493 
Strand
Start bp2821328 
End bp2823199 
Gene Length1872 bp 
Protein Length623 aa 
Translation table11 
GC content66% 
IMG OID640072294 
Productputative inner membrane protein translocase component YidC 
Protein accessionYP_354149 
Protein GI77464645 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0706] Preprotein translocase subunit YidC 
TIGRFAM ID[TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGATC AGAACAAGAA CCTCATCCTG GCGACCGGAC TCAGCTTCCT CGTGATCATG 
GTCTGGTTCT TCCTGTTCCC GCCCCCGGAG GCGGTGACGG AAGGCGAGCC CACGGTCGCG
ACGCAGCAAA CCGCCGTGGC CCCCTCGGCC ACCCCGGATG CTCCGACGAC CGCCGTGCCG
CCGGACGCGG ATCTGCCCGA GACCCAGCGT GTCGTCATCG ACACGCCGCG GCTGCAGGGG
TCGATCTCCA TGCTGGGCGG GCGGCTCGAC GACCTGTCGC TCAAGTCCTA CCACGAGACG
CTCGATCCGC AGTCGCAGAT CGTCCGCCTG CTCTCGCCGG TGGGCCAGCC CAACGCCTAT
TACGCCCTTT ACGGCTGGAC CCCCGCCGGG GCGCTCGGCT ACGAGGACGT GCCCGGCGCC
AACACGACCT GGACCCAGGT CGGCAGCGGC GCGCTCGGCG TGGACCAGCC GGTGACGCTG
CAGTGGGACA ATGGCAAGGG TCTCGTCTTC ACGCGGACGA TCTCGGTCGA TGACCATTAC
ATGTTCAGCG TGGCGCAGAC GGTCGAGAAC AATTCCGGCC AGGCCGTCCA GCTCGCGCCG
TACGGCATCG TCGCCCGCCA TGGCAAGCCC CTGAACCTGC AGAATTTCTT CGTTCTTCAC
GAGGGTGTCG TCGGCCGCGC CGACGGCAAG CTCACCGAGA CGAAATACGA CAAGGTGGCC
GAGCTGCCGC AGGTCGCGCG CGAAGGCGCG CAGGCCGAGG TGATCGACGC GCAGCAGGAC
GGCTGGATCG GCTTCACCGA CAAATACTGG ATGACGACGC TGATCCCGCA GCAGGGCCAG
CCCTTCACCA GCGTCACGAA ATACGTCCCC GGCGCCGACA TCTATCAGGC CGAGACGCGC
GAACAGCTCG TCACCGTCGC GCCCGGCGCC ACGGCCGAAG TGAGCTCGCG CCTCTTCGCC
GGCGCGAAGG AATGGGAGAC GATCCGCGCC TACCAGAACG AGGGCGCGAC TGAGCCCACC
GAGGGAGCCG AGCCGATCCC GGGCTTCATC GACTCGATCG ACTGGGGCTG GTTCTTCTTC
CTGACCAAGC CGATCTTCAC GGTGCTGCAC TGGCTCAACC ACATGATCGG CAACATGGGT
CTTGCCATCA TCGCGCTGAC CTTCCTGCTC AAGGCGCTGG TGCTGCCGCT GGCCTACAAG
TCCTACGTCT CGATGGCCCG CATGAAGGAA CTGCAGCCCG AGCTCGAGGC GCTGCGCGAG
CGCGCCGGCG ACGACAAGAT GCTCATGCAG CGCGAGATGA TGCGGCTCTA CAAGGAGAAG
CAGGTGAACC CGGCCGCGGG CTGCCTGCCG ATCCTGATCC AGATCCCGAT CTTCTTCTCG
CTCTACAAGG TGATCTTCGT CACGATCGAG CTGCGCCATG CCCCCTTCTT CGGCTGGCTG
AAGGACCTGT CGGCGCCCGA TCCGTCCTCG ATCTTCAACT TCTTCGGCCT CGCCCCCTGG
GCCGCGCCGA CGCCCGGCAC GACGATGGCG CTGATCTTCA TCGGGGCCCT GCCGATCCTG
CTCGGCGTCT CGATGTGGCT GCAGCAGAAG CTGAACCCGG CACCCGGGGA CAAGGCGCAG
GCGATGATCT TCGCCTGGAT GCCCTGGGTC TTCATGTTCA TGCTCGGCCA CTTCGCCTCG
GGCCTGGTGC TCTACTGGAT CGTGAACAAC CTCATCACCT TCACCCAGCA GTATGTCATC
ATGCGCAGCC ACGGCCATCA CCCGGACATC TTCGGCAACA TCAAGGCCAG CTTCAGCCGC
AAGCCCGCGG CGCAGCCCGC CGGCAAGGCC GCGAACGACG GTGCGGCGCC GGCGAAGAAG
CGGAAACCAT GA
 
Protein sequence
MDDQNKNLIL ATGLSFLVIM VWFFLFPPPE AVTEGEPTVA TQQTAVAPSA TPDAPTTAVP 
PDADLPETQR VVIDTPRLQG SISMLGGRLD DLSLKSYHET LDPQSQIVRL LSPVGQPNAY
YALYGWTPAG ALGYEDVPGA NTTWTQVGSG ALGVDQPVTL QWDNGKGLVF TRTISVDDHY
MFSVAQTVEN NSGQAVQLAP YGIVARHGKP LNLQNFFVLH EGVVGRADGK LTETKYDKVA
ELPQVAREGA QAEVIDAQQD GWIGFTDKYW MTTLIPQQGQ PFTSVTKYVP GADIYQAETR
EQLVTVAPGA TAEVSSRLFA GAKEWETIRA YQNEGATEPT EGAEPIPGFI DSIDWGWFFF
LTKPIFTVLH WLNHMIGNMG LAIIALTFLL KALVLPLAYK SYVSMARMKE LQPELEALRE
RAGDDKMLMQ REMMRLYKEK QVNPAAGCLP ILIQIPIFFS LYKVIFVTIE LRHAPFFGWL
KDLSAPDPSS IFNFFGLAPW AAPTPGTTMA LIFIGALPIL LGVSMWLQQK LNPAPGDKAQ
AMIFAWMPWV FMFMLGHFAS GLVLYWIVNN LITFTQQYVI MRSHGHHPDI FGNIKASFSR
KPAAQPAGKA ANDGAAPAKK RKP