Gene RSP_1031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_1031 
Symbol 
ID3720941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007493 
Strand- 
Start bp2795256 
End bp2795900 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content67% 
IMG OID640072260 
ProductDNA-(apurinic or apyrimidinic site) lyase / endonuclease III 
Protein accessionYP_354116 
Protein GI77464612 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.474778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCGCC AACTCGATTA CCGCACGATC CACGAGATCT TCGCCCGCCT CCATGCGCTG 
GAGGCGGAGC CCAGGGGCGA GCTCGAGCAT GTGAATGCCT ATACGCTCCT CGTGGCGGTG 
GCGCTCTCGG CGCAGGCGAC GGATGCGGGG GTGAACAAGG CCACGCGGGC GCTTTTCGCC 
CAGGTGACGA CGCCCGCCCA GATGCTGGAG CTGGGCGAGG AGGGGCTTAC CGAACATATC 
CGCACCATCG GCCTCTATCG CAACAAGGCC AGGAACGTGA TCGCGCTGAG CCGCCTGCTC 
GTCGATCAGT ACGACGGCGA GGTGCCCTCG TCGCGCGCGG CGCTCCAGTC GCTGCCGGGC 
GTGGGGCGGA AGACGGCCAA TGTGGTGCTG AACATGTGGT TCCACCAGCC GGCGATGGCG 
GTCGACACCC ATATCTTCCG CGTGGCCAAC CGCACCGGCA TTGCCCCCGG CCGCGATGTG 
GAAGCGGTCG AGCGGGCGCT CGAGGATCAT GTGCCGGCGC CCTTTGCGCT CCATGCGCAT 
CACTGGCTCA TCCTGCACGG ACGCTACATC TGCGTCGCGC GCAAACCCAG ATGCGGCATC 
TGCCCGATCC GCGATCTCTG CCCTTACGAG GAAAAGACGG CATGA
 
Protein sequence
MARQLDYRTI HEIFARLHAL EAEPRGELEH VNAYTLLVAV ALSAQATDAG VNKATRALFA 
QVTTPAQMLE LGEEGLTEHI RTIGLYRNKA RNVIALSRLL VDQYDGEVPS SRAALQSLPG 
VGRKTANVVL NMWFHQPAMA VDTHIFRVAN RTGIAPGRDV EAVERALEDH VPAPFALHAH 
HWLILHGRYI CVARKPRCGI CPIRDLCPYE EKTA