| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_1028 |
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| Symbol | |
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| ID | 3720996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | + |
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| Start bp | 2790472 |
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| End bp | 2793285 |
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| Gene Length | 2814 bp |
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| Protein Length | 937 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640072257 |
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| Product | DNA polymerase I |
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| Protein accession | YP_354113 |
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| Protein GI | 77464609 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.447207 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGTTCG GCAAGGGCCA CCATCTGCAT CTCATCGACG GTTCGGCCTT CATCTTCCGG
GCCTACCATG CGCTGCCGCC GCTGACGCGG AAGTCGGACG GCCTGCCCGT GGGCGCGGTC
GCGGGCTTCT GCAACATGCT GTTCCGCTAT GTCGAGAACA ACAAGGGCCC CGACGCGCCG
ACCCATGTGG CGGTGATCTT CGACCATTCC TCGAAGACCT TCCGCAACGA GATCTACCCG
CTCTACAAGG CGCAGCGCCC CGAGCCGCCC GAGGATCTGC GCCCGCAGTT CCCGCTCACG
CGCGAGGCGA CGCGGGCCTT CAACATTGCC TGCATCGAGA CCGAAGGGTT CGAGGCCGAC
GACATCATCG CGGCCCTCTC GTGCAAGGCG CGCGACGCGG GCGGCTCGGT CACGATCCTG
TCCTCGGACA AGGATCTGAT GCAGCTGGTG GGCGACGGGG TCGAGATGCT CGACCCGATG
AAGAACAAGC GGATCGGCCG CGACGAGGTG TTCGAGAAAT TCGGCGTCTA CCCCGAGCGC
GTCGTGGATG TGCAGGCGCT GGCGGGCGAT TCCATCGACA ACGTGCCGGG CGCGCCGGGC
ATCGGCATCA AGACGGCCGC GCTGCTGATC CAGGAATACG GCGATCTCGA GAGCCTGCTC
GCGCGGGCGG GCGAGATCAA GCAGCCCAAG CGCCGCGCCG CCATCGAGGA GAATGCCGAA
CAGATCCGCA TCTCGAAGCG GCTGGTGGCG CTTGACTGCA ACACCCCGCT TACGTTCTCG
CTCGAGGATC TCGAGGTGCG TCTGCCGGTG GCCGACGACC TTCTGGGCTT TCTCAACCGG
ATGGAATTCC GCACCCTGAC GACCCGTGTG GCCGCGAGCC TGAAGGTCGA GCCGCCTCCC
GCCCCCACCG CCGCCGTCCT CCGGAACGAG GGCGTGCCCG AGATCGTCGA GCAGGTCGAG
GCGGCGCTGC CTTTCGACAG CGCCTCCTAT GCCTGCATCC GCGATGCCGA GGCGCTGGCC
GCCTGGATCG CGCGCATCCG CGACCTGGGC CATGTCGCCA TCGACACCGA GACCACCAGC
CTCGACGAGA TGCGTGCCGA ACTGGTGGGG ATCTCGCTCT GCGTCGAGGC GGGGGCCGCC
TGCTACATCC CGCTCGGCCA CCGGGCTGGC GGCGGCGATC TCTTCGGCGC CTCGGAGCTC
GTGGCCGACC AGATGCCGCT GGGTCTGGCG CTGTCGATGC TGAAGCCGGT GCTCGAGGAT
GAGTCCATCC TCAAGATCGG CCAGAACATG AAGTACGACG CGAAGATCCT CGCGCGTCAC
GGCATCCGGG TGGCGCCGAT CGACGATACG ATGCTCATGT CCTACGCGAT GCACGCGGGC
CGCCACGGCC ACGGGATGGA CGAGCTCTGC GACACCTACC TTGGCCACAA ACCCATCGCG
ATCAAGACGC TCCTGGGTTC GGGCAAGAGC CAGATCACCT TCGACCGGGT GCCGGTCGAG
CAGGCCGTCT GCTATGCGGC CGAGGATGCG GATGTGACCT TCCGGCTCTG GAAGCTGTTC
AAGCCGCAGC TGCACCGCGC CCGGGTGACG ACGGTCTACG AGACGCTCGA GCGGCCGCTG
GTGCCGGTGC TGGCCGAGAT GGAGATGGCG GGCGTTCAGG TCGACCGCGA CACGCTCTCG
CGGATGTCGA ACGCCTTCGC GCAGAAGATG GCGGGGCTCG AGGCCGAGAT CCACGCGCTG
GCGGGCGGCC CGTTCAACGT GGGCAGCCCC AAGCAGCTGG GCGAGATCCT GTTCGAGAAG
ATGGGCCTGC CCGGGGGCCA GAAGGGCAAG AACGGCGCCT GGGGCACCGG GGCCGACGTG
CTCGAGGATC TGGCGGCCGA GGGGCACGAC CTGCCCGCGC GCGTGCTCGA CTGGCGCCAG
CTCTCCAAGC TGAAATCGAC CTACACCGAC GCGCTGCAGG AGCATATCCA CCCCGAGACG
GGCCGCGTCC ACACCTCCTA TTCCATCGCC GGAGCGAACA CGGGCCGCCT CGCCTCGACC
GATCCGAACC TCCAGAACAT CCCCGTGCGC AGCGAGGAGG GCCGCCGCAT CCGCGAGGCC
TTCGTGGCGC CGCCGGGCAA GCTTCTGGTC AGCCTCGACT ACAGCCAGAT CGAGCTGCGC
ATCCTCGCCC ATATCGCCGA CATTCCGGCG CTGAAGCAGG CCTTCCGCGA GGGGCACGAC
ATCCATGCGA TGACCGCCTC CGAGATGTTC AACGTGCCGC TCGAAGGCAT GGATCCGATG
ATCCGGCGGC AGGCCAAGGC CATCAACTTC GGCGTGATCT ACGGGATCTC GGGCTTCGGC
CTCGCACGCA ACCTGCGCAT CCCGCGGGCC GATGCGCAGG GCTTCATCGA CCGCTATTTC
GAGCGTTTCC CCGGCATCCG CGGCTATATG GACGAGACCA TCGCCTTCGC CAAGGCGAAC
GGTCATGTGG AAACCCTGTT CGGACGCAGG ATCAACACGC CCGAGATCAA TGCCAAGGGG
CCCGGCGCGG GCTTCGCGCG CCGCGCGGCC ATCAACGCGC CGATCCAGGG CACGGCGGCC
GACGTGATCC GCCGGGCGAT GATCCGGATG CCGAAGGCGA TCCGGGGCAT GCCCGCGACC
ATGCTGCTGC AGGTCCATGA CGAACTGCTG TTCGAGGTGG AGGAAGAGGC CGCTGACGCG
CTCATCGAGC GCGTGCGCGA GGTGATGGAA GGTGCGGCCG ACCCGGCGGT GAAGCTCACC
GTGCCGCTGA CGGTGGAGGC GGGCCGCGGC CTGAACTGGG CCGCCGCCCA CTGA
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| Protein sequence | MTFGKGHHLH LIDGSAFIFR AYHALPPLTR KSDGLPVGAV AGFCNMLFRY VENNKGPDAP
THVAVIFDHS SKTFRNEIYP LYKAQRPEPP EDLRPQFPLT REATRAFNIA CIETEGFEAD
DIIAALSCKA RDAGGSVTIL SSDKDLMQLV GDGVEMLDPM KNKRIGRDEV FEKFGVYPER
VVDVQALAGD SIDNVPGAPG IGIKTAALLI QEYGDLESLL ARAGEIKQPK RRAAIEENAE
QIRISKRLVA LDCNTPLTFS LEDLEVRLPV ADDLLGFLNR MEFRTLTTRV AASLKVEPPP
APTAAVLRNE GVPEIVEQVE AALPFDSASY ACIRDAEALA AWIARIRDLG HVAIDTETTS
LDEMRAELVG ISLCVEAGAA CYIPLGHRAG GGDLFGASEL VADQMPLGLA LSMLKPVLED
ESILKIGQNM KYDAKILARH GIRVAPIDDT MLMSYAMHAG RHGHGMDELC DTYLGHKPIA
IKTLLGSGKS QITFDRVPVE QAVCYAAEDA DVTFRLWKLF KPQLHRARVT TVYETLERPL
VPVLAEMEMA GVQVDRDTLS RMSNAFAQKM AGLEAEIHAL AGGPFNVGSP KQLGEILFEK
MGLPGGQKGK NGAWGTGADV LEDLAAEGHD LPARVLDWRQ LSKLKSTYTD ALQEHIHPET
GRVHTSYSIA GANTGRLAST DPNLQNIPVR SEEGRRIREA FVAPPGKLLV SLDYSQIELR
ILAHIADIPA LKQAFREGHD IHAMTASEMF NVPLEGMDPM IRRQAKAINF GVIYGISGFG
LARNLRIPRA DAQGFIDRYF ERFPGIRGYM DETIAFAKAN GHVETLFGRR INTPEINAKG
PGAGFARRAA INAPIQGTAA DVIRRAMIRM PKAIRGMPAT MLLQVHDELL FEVEEEAADA
LIERVREVME GAADPAVKLT VPLTVEAGRG LNWAAAH
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