| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_1015 |
|---|
| Symbol | |
|---|
| ID | 3720982 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | + |
|---|
| Start bp | 2773994 |
|---|
| End bp | 2775949 |
|---|
| Gene Length | 1956 bp |
|---|
| Protein Length | 651 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640072243 |
|---|
| Product | von Willebrand (VWA) domain-containing protein |
|---|
| Protein accession | YP_354099 |
|---|
| Protein GI | 77464595 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2304] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACG ACCGCACCGA CGACGATCTC GAGGCTCTGC GCCGGGCACT CGCGCGCGAG
GCGGCTCCAG CGCCCGATCC CGAGGCACGG GCGCGCGCCA TGGCGCTGGC GCTCGAGAAT
TACGACAGGT TCCAAGGACG GGCGAGCGGG CTGCGTCAGG GGAAGGACCG CCCGGCCGGG
GCGGGGTTCC TCAACGGAGT GCGCCGCATG TCGGGTTCCT TCTTCTCCCG CCCCCTTCTC
GCCGCCACCG GATCGGTCGC GGCTCTGGGC CTCGCCCTCG TCGTGGTGAT GCCGAACGCG
CGGCTGGCCG AGCCGCCGCA GACCGCGCCG GACGCGCCCG AGGCGGATGC CCGCCTCGCC
GCCGCGCCGG ACGCGGGTGG CGGGGCCGAG ACGGCCGGTG CGCCGGTTCC CGCGGAACCG
CGGGCACGGA GCGCCGAGGG CGCCGCCCCG CAGACCTTCG CCGCCGACGA AGCGATGCCC
ATGGCTGCGC CGCCCGCGCC GGATCTCGCC CTCTCGAAGC AGGCCGCCGA AGCCCCCGCG
CGCGCCCTTC CGCAGGGCGA CAGCGAGGCC TTCGCGAATG CGCCCGACAA TCCGCTCCGC
GTGACCGCCG AGGATCCCGT CTCGACCTTC TCGATCGACG TGGATACGGC AAGCTACGCG
ATCCTCCGCT CGAGCCTGCG GGCCGGGCAG CTTCCCCCGC GCGAGGCGGT GCGGATCGAG
GAGATGATCA ACTACTTCCC GTACGATTAC CCGGCGCCGG AGAACGGAAC GCCGCCCTTC
CGCCCCACCC TCTCCGTCAC CCGGACGCCC TGGAACCCGG AGACGCAGCT CGTCCATGTG
GCGCTGCAGG GCCGGATGCC CGCCATCGAG GACCGGCCGC CGCTGAACCT CGTCTTCCTG
ATCGACACGT CGGGCTCGAT GCAGGATCCG GCGAAGCTGC CGCTCCTCAA GCAGTCGTTC
GGGCTGATGC TCGGCCGCCT GCGCCCCGAG GATCAGGTGG CCATCGTGAC CTATGCCGGC
TCGGCGGGCG AGGTGCTGGC GCCCACGGCC GCGAACCAGC GCAGCACCAT CCTCTCCGCC
CTCGACCGGC TCGATGCCGG CGGATCGACC GCGGGAGAGG AGGGGCTGGC GCTCGCCTAC
CGGACGGCCT CGGAAATGGC GGGCGCGGGC GAGGTCACGC GCGTGGTGCT GGCCACCGAC
GGAGACTTCA ACCTCGGGAT CAGCGACCCG GAAGAGCTGG CCCGCCTCGT GGCGCACGAG
CGCGACACCG GCATCTATCT CTCGGTGCTG GGCTTCGGGC GCGGCAATCT CGACGATGCG
ACGATGCAGG CGCTGGCGCA GAACGGCAAC GGGCAGGCCG CCTATATCGA CAGTCTGAAC
GAGGCGCAGA AGGTTCTGGT CGACCAGCTC AGCGGCGCGC TCTTTCCCAT TGCCGACGAT
GTGAAGGTGC AGGTGGAGTG GAACCCGGCC CGCGTCGCGG AATACCGGCT CATCGGCTAC
GAGACCCGCG GCCTGCGCCG CGAGGATTTC GCCAACGACC GGGTCGATGC GGGCGAGATC
GGCGCCGGCC ATGCGGTGAC GGCGATCTAC GAGATCACGC CGGTGGACAG CCCCGCGCGC
CTGACCGATC CCCTGCGCTA CGGCGCCGAA CCGCCCGAGG GCGCGCATGG CGACGAACTG
GGCTTCCTGC GGCTGCGCTA CAAGGCGCCG GGCGAGAGCA CATCGACCCT GATCGACACG
CCGATCCCGG ACATGCTGAC CGAGGCCTCC GAGGACGTGC GCTTCTCCAC CGCCATCGCG
GGCTTCGGCG AGCTTCTGCG CGGGTCGGAC AAGCTCGGCG CCTGGGGCTG GGACGAGGCC
ATCGCCTTGG CCGACGGGGC GCGCGGGGCC GATCCCTTCG GCTACCGGGT AGAGGCCGTC
CAGCTGATGC GCCTGGCCGA GAGCCTCAGC CGCTGA
|
|---|
| Protein sequence | MSDDRTDDDL EALRRALARE AAPAPDPEAR ARAMALALEN YDRFQGRASG LRQGKDRPAG
AGFLNGVRRM SGSFFSRPLL AATGSVAALG LALVVVMPNA RLAEPPQTAP DAPEADARLA
AAPDAGGGAE TAGAPVPAEP RARSAEGAAP QTFAADEAMP MAAPPAPDLA LSKQAAEAPA
RALPQGDSEA FANAPDNPLR VTAEDPVSTF SIDVDTASYA ILRSSLRAGQ LPPREAVRIE
EMINYFPYDY PAPENGTPPF RPTLSVTRTP WNPETQLVHV ALQGRMPAIE DRPPLNLVFL
IDTSGSMQDP AKLPLLKQSF GLMLGRLRPE DQVAIVTYAG SAGEVLAPTA ANQRSTILSA
LDRLDAGGST AGEEGLALAY RTASEMAGAG EVTRVVLATD GDFNLGISDP EELARLVAHE
RDTGIYLSVL GFGRGNLDDA TMQALAQNGN GQAAYIDSLN EAQKVLVDQL SGALFPIADD
VKVQVEWNPA RVAEYRLIGY ETRGLRREDF ANDRVDAGEI GAGHAVTAIY EITPVDSPAR
LTDPLRYGAE PPEGAHGDEL GFLRLRYKAP GESTSTLIDT PIPDMLTEAS EDVRFSTAIA
GFGELLRGSD KLGAWGWDEA IALADGARGA DPFGYRVEAV QLMRLAESLS R
|
|---|
| |