Gene RSP_1014 details

Gene Information

• Locus tag: RSP_1014
• ID: 3720981
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodobacter sphaeroides 2.4.1
• Kingdom: Bacteria
• Replicon accession: NC_007493
• Strand: +
• Start bp: 2773458
• End bp: 2773997
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 640072242
• Product: sigma24
• Protein accession: YP_354098
• Protein GI: 77464594
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.42347
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGACAT CCGATGAAAG GCTGGCCGGG GCGGCCGCGG AGGGCGACCG CGGGGCCTTC 
GCCCTGCTGG TCGAACGGCA TTACGACCGG ATCTTCGGGC TGAGCTGGCG GTTGACCGGC 
AGCCGCACCG AGGCCGAGGA TCTGGCGCAG GACATCTGCG CCGCCCTGCC GATGAAGCTG 
CGGGGCTGGC GCGGCGAGGC GCGCTTCACC ACTTGGCTCT ACCGCGTGGT GGTGAACGCG 
TCCCACGACC TGCGCCGCCG GCAGTCGGCG CACAGCCGCG CGGCCGCGGG CTGGGGCGAC 
TGGGAACTGG CGCGGCAGGA CGAGATCGGC GAGGCGCGCG CGGCCGAGGA ATGGCTGGCC 
GCCGCCATGA CCGCCCTGCC GGTCGAGCTG CGCGACACGG TGGCGCTGGT GCTGGGCGAG 
GAGATGACGC AGGCCGAGGC CGGCGCCGTT CTGGGGCTGG CCGAGGGCAC CGTGGCCTGG 
CGCATGTCGG AGGTGAAGAA ACGCTTGAGG GCCATGGCTC TCCGGGAGGC CCGCGCATGA 

 

Protein sequence

METSDERLAG AAAEGDRGAF ALLVERHYDR IFGLSWRLTG SRTEAEDLAQ DICAALPMKL 
RGWRGEARFT TWLYRVVVNA SHDLRRRQSA HSRAAAGWGD WELARQDEIG EARAAEEWLA 
AAMTALPVEL RDTVALVLGE EMTQAEAGAV LGLAEGTVAW RMSEVKKRLR AMALREARA