| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0976 |
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| Symbol | sdhA |
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| ID | 3720729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | + |
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| Start bp | 2735804 |
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| End bp | 2737606 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640072203 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_354060 |
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| Protein GI | 77464556 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGCTT ACACTTACGA GACGCATGAC TACGACGTCG TGGTGGTGGG CGCCGGCGGC
GCCGGCCTCC GCGCGACGCT CGGCATGGCC GAACAGGGCC TGCGCACCGC CTGCGTCACC
AAGGTTTTCC CCACGCGCAG CCACACGGTG GCGGCGCAGG GCGGCATCGC CGCCTCTCTC
GCCAACATGG GCCCGGACAA CTGGCAGTGG CACATGTACG ACACCGTGAA AGGGTCGGAC
TGGCTGGGCG ACACGGACGC GATGGAATAT CTCGCCCGCG AGGCCCCGAA GGCGGTCTAC
GAGCTCGAGC ATTACGGCGT GCCCTTCTCG CGTACCGAGG AGGGCAAGAT CTACCAGCGC
CCGTTCGGCG GCCACACCAC CCAGTTCGGC GAGGGCCCGC CCGTGCAGCG CACCTGCGCC
GCGGCCGACC GCACCGGCCA CGCGATCCTG CACACGCTCT ACGGCCAGTC GGTCAAGAAC
AACGCCGAGT TCTTCATCGA ATATTTCGCG CTGGATCTCA TCATCCAGGA CGGCCGCTGC
ACCGGCGTGG TGGCGTGGAA GCTGGAAGAC GGCACGATCC ATGTCTTCAA CGCCAAGCTC
ACGGTTCTGG CCACGGGCGG CTACGGCCGC GCCTACTTCT CGGCCACCTC GGCCCACACC
TGCACCGGCG ACGGCGGCGG GATGGTGGCG CGCGCCGGCC TGCCGCTTCA GGACATGGAG
TTCGTACAGT TCCACCCGAC CGGCATCTAC GGCTCGGGCT GCCTCATCAC CGAGGGCGCG
CGCGGCGAGG GCGGCTACCT CACCAACTCG AACGGCGAAC GGTTCATGGA GCGCTACGCT
CCGACCTACA AGGATCTGGC CTCCCGCGAC GTGGTCAGCC GCTGCATGAC GCTCGAGATC
CGCGAGGGTC GCGGCGTGGG CGAGCATGGC GACCATATCC ACCTGCACCT GAACCACCTG
CCGCCCGAGA CGCTGGCCCT GCGCCTGCCG GGCATCTCGG AATCGGCCAA GATCTTCGCG
GGGGTCGACC TCCACAAGGA GCCGATCCCG GTGCTGCCGA CCGTGCATTA CAACATGGGC
GGCATCCCCA CCAACTACTG GGGCGAGGTG CTGGCACCCA CCGAGGGCGA TCCCGACCGC
GTCTTCCCCG GCCTGATGGC CGTGGGCGAG GCGGGCTGCG CCTCGGTGCA CGGGGCGAAC
CGCCTCGGCT CGAACTCGCT CATCGACCTC GTGGTCTTCG GCCGCGCCGC GGCGATCCGC
GCGGGCCAGA TCGTGAAGCC GCACGAATTC CATCCCGACG TGCCGAAGGT CCAGGTGGAC
GAGATCCTCG GCCGGTTCGA CGATCTGCGC CACGCGAACG GCGCGGTGCC GACGGCCGAG
CTGCGGCTCG AGATGCAGCG CACCATGCAG GCCGACGCGG CGGTGTTCCG CACCGACAAG
ACGCTGGCCG AAGGCGTCGA GAAGATGAAG GGCATCGCGG CGAAGCTCGG GGACCTGAAG
GTCACCGACC GCAGCCTCAT CTGGAACTCG GACCTGATGG AGACGCTCGA GCTCACGAAC
CTCATGCCGA ACGCGCTCGC CACCATCGTC GCGGCCGAGG CGCGCAAGGA GAGCCGCGGG
GCCCATGCCC ACGAGGACTG GCCCAACCGC GACGACGAGA ACTGGCGCGT CCACAGCCTG
GCGGTCGTGA AGGGCAACGA GGTCACGCTG ACCACCCGGC CCGTCCATCT CGATCCGCTC
ACGAAGCAGA CCGAGGGCGG GATCGATCTG AAGAAGATCG CCCCCAAGGC GCGGGTCTAC
TGA
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| Protein sequence | MAAYTYETHD YDVVVVGAGG AGLRATLGMA EQGLRTACVT KVFPTRSHTV AAQGGIAASL
ANMGPDNWQW HMYDTVKGSD WLGDTDAMEY LAREAPKAVY ELEHYGVPFS RTEEGKIYQR
PFGGHTTQFG EGPPVQRTCA AADRTGHAIL HTLYGQSVKN NAEFFIEYFA LDLIIQDGRC
TGVVAWKLED GTIHVFNAKL TVLATGGYGR AYFSATSAHT CTGDGGGMVA RAGLPLQDME
FVQFHPTGIY GSGCLITEGA RGEGGYLTNS NGERFMERYA PTYKDLASRD VVSRCMTLEI
REGRGVGEHG DHIHLHLNHL PPETLALRLP GISESAKIFA GVDLHKEPIP VLPTVHYNMG
GIPTNYWGEV LAPTEGDPDR VFPGLMAVGE AGCASVHGAN RLGSNSLIDL VVFGRAAAIR
AGQIVKPHEF HPDVPKVQVD EILGRFDDLR HANGAVPTAE LRLEMQRTMQ ADAAVFRTDK
TLAEGVEKMK GIAAKLGDLK VTDRSLIWNS DLMETLELTN LMPNALATIV AAEARKESRG
AHAHEDWPNR DDENWRVHSL AVVKGNEVTL TTRPVHLDPL TKQTEGGIDL KKIAPKARVY
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