| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0937 |
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| Symbol | |
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| ID | 3720765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | + |
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| Start bp | 2687731 |
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| End bp | 2689377 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640072163 |
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| Product | alpha amylase domain-containing protein |
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| Protein accession | YP_354020 |
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| Protein GI | 77464516 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | [TIGR02456] trehalose synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATCA GCCGCACGAG CGATGTCTGG TGGAAGAACG CCGTCTTCTA TTGTCTCGAT
GTCGAGACCT TTCAGGACAG CAACGGCGAC GGGATCGGAG ATTTCGCGGG GCTGACCCGG
CGGCTCGACC ATCTCGACCG GCTGGGGGTG AGCTGCATCT GGCTGATGCC CTTCTATCCC
AGCCCGAACC AGGACGATGG CTACGACATC ACCGACTATT ACTCCGTCGA TCCCCGCCTC
GGCACGCTGG GCGATTTCGT CGAGTTCCTG CGCGCGGCCC ATGACCGCGG GATGCGGGTG
ATCGCGGACC TCGTGGTGAA CCACACCTCG CGCGAGCATC CGTGGTTCCA AGCCTCGCGC
GCCGATCCCG ATTCGCCCTA CCGCGACTGG TATGTCTGGC GCGATGAGAA ACCCGACGAG
GATGCCGCCT CGCTGGTCTT CCCCGGAGAA GAGAACAGCA GCTGGACCTG GGACGCGAAG
GCGGGGAAAT ACTATCTCCA CCGCTTCTAC AGCCACCAGC CGGACCTGAA TGTCGAGAAC
CGCGCGGTGC GCGACGAGAT CCAGCGGATC GTGGGCTTCT GGCTCCAGCT CGGCCTGTCG
GGCTTCCGCG TGGATGCCGT GCCCTTCCTG CTCGAGCAGA TGTCGACGGT GGACACGGGC
TTCGCGCCGC ACCGCTGGCT GCGCGACCTG CGCGCCTTCA TCAACCGCCG GTCGGGCGAT
GCGGTGCTTC TGGGCGAGGT GAACCTCGAC TACCCGGACG TGCGCCGCTT CTTCGGCGAC
GAGGATGGCG ACGAGCTGCA CATGTGCCTC GACTTCAACC TCAATCAGGC GATGGCGCTG
GCGCTGGCCC GCGAGGATGC GGGGCCCATC GTCCACGGGC TGCGCCACAT GCCCGAACTC
GCGCCCGACG ATGGCTGGGC GCATTTCCTG CGCAATCACG ACGAATGGTC GCTCGACAAG
CTGACCGAGG CCGAGCGGCA GGAGGTCTTC GCCTCCTTCG GGCCCGATCC CTCGATGCAG
CTCTTCGGAC GCGGCCTGCG GCGGCGGATG CCCACCATGC TGAAGGGCAA TCCCGACCGG
CTGCGGATGG CCTATGCGCT GATGGCCTCG ATGCCGGGCT CACCCGTGAT CTTCTATGGC
GAGGAGATCG GCATGGCGGA AAATCTCGAG ATCCCCGGAC GGCTCGCCGT GCGCGCGCCG
ATGCAGTGGG ATGCCGGCCC GCATGGCGGT TTCTCGAACG CGAGCACCGA GGCCCTGCAC
CGGCCCATGG TCTCGGATCC GCAATGGGGA CCCGGGAAGG TCAATGCCAT CGACCAGCAG
GACCGGCCGG ACACGATGTT CCACTTCATG GAGCATCTCC TGCGGCGGCG GCGGGAGTGC
CCCGAGATCG CCTTCGGCGA GCATGCCGTG CTGCCGTTTC CCGAGCCCGA GATCTTCGCC
ATCCGGCACG ACTGGGAGGG CCGTACGCTC ATCGCTCTCG CCAATCTCGG CGCAAAGCCG
CAGAAGGTGA CGCTCACGCT GCCGAAGGCC TCGGGGCTGG GCAGGCTGCG GCCCATCCTC
GGCGAGGGGA AGGTCTCGCT GCGCAAAGAC GAGCTGACGG TCGAGCTCGG GGGCTACGGG
CTGCGCTGGG TGCGGTTCGA GAGCTGA
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| Protein sequence | MDISRTSDVW WKNAVFYCLD VETFQDSNGD GIGDFAGLTR RLDHLDRLGV SCIWLMPFYP
SPNQDDGYDI TDYYSVDPRL GTLGDFVEFL RAAHDRGMRV IADLVVNHTS REHPWFQASR
ADPDSPYRDW YVWRDEKPDE DAASLVFPGE ENSSWTWDAK AGKYYLHRFY SHQPDLNVEN
RAVRDEIQRI VGFWLQLGLS GFRVDAVPFL LEQMSTVDTG FAPHRWLRDL RAFINRRSGD
AVLLGEVNLD YPDVRRFFGD EDGDELHMCL DFNLNQAMAL ALAREDAGPI VHGLRHMPEL
APDDGWAHFL RNHDEWSLDK LTEAERQEVF ASFGPDPSMQ LFGRGLRRRM PTMLKGNPDR
LRMAYALMAS MPGSPVIFYG EEIGMAENLE IPGRLAVRAP MQWDAGPHGG FSNASTEALH
RPMVSDPQWG PGKVNAIDQQ DRPDTMFHFM EHLLRRRREC PEIAFGEHAV LPFPEPEIFA
IRHDWEGRTL IALANLGAKP QKVTLTLPKA SGLGRLRPIL GEGKVSLRKD ELTVELGGYG
LRWVRFES
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