| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0912 |
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| Symbol | dctM |
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| ID | 3717975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | + |
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| Start bp | 2661465 |
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| End bp | 2662790 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640072137 |
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| Product | TRAP dicarboxylate family transporter DctM subunit |
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| Protein accession | YP_353995 |
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| Protein GI | 77464491 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.836274 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCAG CCCTCATCTT CGGCGGTCTC ATCGCCCTCA TGCTGACCGG CATGCCGATC
TCGATCGCGC TCGGCCTGAC GGTTCTGACC TTCCTCTTCA CCATGACGGC CGTGCCGATC
GACACGGTGG CGCTGAAGCT CTTCACCGGC ATCGAGAAGT TCGAGATCAT GGCGATCCCG
TTCTTCATCC TCGCGGGGAA CTTCCTGACC CACGGCGGGG TGGCGCGGCG GATGATCGCC
TTCGCCACCT CGATGGTGGG CCACTGGCAC GGGGGCCTCG GCCTCGGCGG CGTCTTCGCC
TGCGCCCTCT TCGCCGCCGT CTCGGGCTCT TCGCCCGCGA CCGTGGTGGC CATCGGCTCG
GTCATCCTGC CCGCCATGGT GGCGCAGGGC TTCCCCACCC GCTTCGGCGC GGGCGTCATC
ACCACGAGCG GCGCGCTCGG CATCCTGATC CCGCCGTCCA TCGTGATGGT GATGTATTGC
GTGGCCACCT CGGGGATGAT GGTCGAGGGG CCGGACGGCA CCATCGTCGA TGCGGCCTCG
GTGGGCGAGA TGTTCATCGC GGGCGTGATC CCGGGGATCA TGCTGGCGGG CGCGCTCGCC
CTCACCACCT GGTATCGGGC CTGGAAGAAC GACTATCCCC GCCTGCCGAA GGCCAGCTGG
GGCGAACGCT GGCAGGCCTT CCGCCGGGCG ATCTGGGGCC TCCTGCTCAT CGTGATCGTG
ATGGGCGGCA TCTATACCGG CACCTTCACC CCCACCGAAG CCGCCGCCAT GAGCGCCGTC
TATGCCTTCG TGATCGCGGT CTTCGTCTAC AAGGACATGG GGCTCAGGGA CGTGCCGCGG
GTGCTGCTCG CCTCGGCCAA CATGTCGGCG ATGCTGCTCT ACATCATCAC CAATGCGGTG
CTGTTCAGCT TCCTGCTCAC GCACGAGAAC ATCCCGCAGG CGCTCGGCCA GTGGATGGTG
GATTCGGGCC TGACCTGGTG GATGTTCCTC ATCGCGGTGA ACATCATCCT GCTCGCGGCC
GGCAACTTCA TGGAGCCCTC CTCCATCGTG CTCATCATGG CGCCGATCCT GTTCCCGGTG
GCCGTGCGGC TCGGGATCGA CCCGGTGCAT TTCGGGATCA TGATCATCGT GAACATGGAG
GTCGGCATGT GCCACCCGCC CGTGGGGCTG AACCTCTATG TGGCCTCGGG CATCACCAAG
ATGGGCATCA CCGAGCTCAC CATCGCGGTC TGGCCGTGGC TGCTGACGAT GCTGGCCTTC
CTCCTGCTCG TGACCTACGT CCCGCAGATC TCGCTCTTCC TGCCGCATCT GCTGGGCATG
CGCTGA
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| Protein sequence | MNAALIFGGL IALMLTGMPI SIALGLTVLT FLFTMTAVPI DTVALKLFTG IEKFEIMAIP
FFILAGNFLT HGGVARRMIA FATSMVGHWH GGLGLGGVFA CALFAAVSGS SPATVVAIGS
VILPAMVAQG FPTRFGAGVI TTSGALGILI PPSIVMVMYC VATSGMMVEG PDGTIVDAAS
VGEMFIAGVI PGIMLAGALA LTTWYRAWKN DYPRLPKASW GERWQAFRRA IWGLLLIVIV
MGGIYTGTFT PTEAAAMSAV YAFVIAVFVY KDMGLRDVPR VLLASANMSA MLLYIITNAV
LFSFLLTHEN IPQALGQWMV DSGLTWWMFL IAVNIILLAA GNFMEPSSIV LIMAPILFPV
AVRLGIDPVH FGIMIIVNME VGMCHPPVGL NLYVASGITK MGITELTIAV WPWLLTMLAF
LLLVTYVPQI SLFLPHLLGM R
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