Gene RSP_0909 details

Gene Information

• Locus tag: RSP_0909
• Symbol: dctS
• ID: 3717972
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodobacter sphaeroides 2.4.1
• Kingdom: Bacteria
• Replicon accession: NC_007493
• Strand: -
• Start bp: 2657565
• End bp: 2659550
• Gene Length: 1986 bp
• Protein Length: 661 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 640072134
• Product: PAS/PAC sensor signal transduction histidine kinase
• Protein accession: YP_353992
• Protein GI: 77464488
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.310959
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGAAGAGC GGACAGGCCG GCAGGCGGGC GCACGCCCGA GCGAGCCGTG GGCGCTCGAT 
CCGCCCGCGG ACCGTGGCCG CGTGGATCTG CTCTCGCTCA TGCCGCTGGT GGCCATCGTC 
GCGCTGGTGG CGCTGGTGGC GGCCTCGGTC TGGATCGCGG GCCGCAGCGA GACCGAGCAG 
ATCCGCACCA AGCTTGCGAC CGACGCGCTC TGGGTCGAGC AGACGCTGCG CTTCCAGCTC 
TCGGTCGACG AGGACATGCT GGCGCGCCTT GGGCTGGACG AGGCGGGCGG CACGGCGCCC 
GCCGTGCTCG AGGCGCGGGC ACGGGCCCAT ATCGCGGCCA ATCCCGAGAT CCTCTCGATC 
GTCTGGCACG ATGCGGAGGG CGGCATCCGT CGGGCCGTGC CGGGCCCCGC CGACACCCGC 
GCCGACGAGG AGCTGGCCGC GCAGCTCCGG CGCGCCGAGG CCCGGGCCCG CCCGGTCTAT 
GCGCTGATGG ACGGGCAGAC GGTGACGATG GGCCTGCGGC CGCAGGGCTC GGACGAGGTC 
ATCACCGCCA CCGTCTCGCT GCCCCTGATG CTCGAGCGAC ACATCCCCTG GTGGATCGCC 
GAGCAATATG CGGTCTGGCT GCTCGACGGC AGCGACTCGG TGCGGGCCCG CCGTTCGCGC 
GGGACGCCCG AGCCGGAAGG CCCCAGCCAT TCGATCAGCT TCGATCCGCC GCTTCCGGGC 
GCGGTGCTGC GCATCACCTC CTACGAGGGG GCCGCGCCCT TCGCCCGTGC CCTCCTGCCC 
GCGGCCATCG CGGGGCTGGC GGCCTTCGCG ATCCTCGCGC TCCTCGCCCT TTACCGCAAC 
GCGCAGCGGC GGCGTGCGGC CGAACTGCGG CTGAACGAGG AGATGGCCTT CCGCCGCTCG 
ATGGAGGAGA GCCTGACCGT GGGCCTGCGC GCCAAGGACC ATGCGGGGCG GGTGCTCTAT 
GTCAATTCCG CCTTCTGCAA GCTCGTGGGG TGGAATGCCG AGGATCTGGT CGGCCACGAC 
CAGCCCATGC CCTACTGGGC CCCCGACCGG ATCGAGGAAA CCCTGCGCCG CCAGCGGGCG 
CTGGCCGTGG GCGGCGCCGA GCCGCAGGCC TTCGAGACCC GCTTCCGCCG CAGCGACGGG 
ACCGAGATCG ACGTGCAGGT CTACGAGGCG CCGCTGATCG ACGCGAAGGG GATGCACCGC 
GGCTGGATGG GCTCGATCAT CGACATCACC GAGGCCCGCC GCGCCGCCCG CCTCGCCCGC 
GAGCAGGAGG AGAGCCTTGC GCGGACGGGC CGTCTGGTGA CGCTGGGCGA GATGGCCTCG 
ACGCTGGCGC ATGAGCTGAA CCAGCCGCTC GCCGCCATCG CGAGCTATGC GGCGGGGGCC 
GCGAACCTCC TGCGGCAGGA GCGGGCGGAT CCGGCGCTTC TGTCGTCGGC GCTGGCCAAG 
CTCTCGCATC AGGCCGACCG GGCGGGCCAG ATCATCCGCC GGATCCAGGA TCTCGTGCGC 
AAGCGCGAGC CGCGGTTCTC GGCGCTCGAT CTGGCGACGG TCGTGCGCGA GACCGCCGGT 
TTCCTCGAGG CGGATGCGCG GGTGCGCGGG GTGCGGATCG CGGTCGACGT GGCGCCCGCG 
CCGCTTGTGC TCGCCGACCG GATCCTGCTC GAGCAGCTCC TCATCAACCT CATGCGCAAC 
GGCATCGAGG CGATGGGCGA GGCGGGAGCC GTCGATGCGC TGACCGTGAG CCTCCGCCCC 
GGGCCCGCGC GCGCCGTGAT CGAGGTGGCC GACCGGGGCC CCGGCATCGC GCCCGAGGTG 
GCCGACCGGC TGTTCGACGC CTTCACCTCG ACCAAGGCCG AGGGTATGGG CATCGGGCTG 
AACATCTGCC GCACCATCGT CGAGATGCAC CGCGGCCGCC TGACCCACCG CCCGCGCGAG 
GGCGGGGGCA CCGTGTTCCG GGTGGCGTTG CCCGCCGCCG CCGAAGAAGG AGTGGCCGCC 
GAATGA 

 

Protein sequence

MEERTGRQAG ARPSEPWALD PPADRGRVDL LSLMPLVAIV ALVALVAASV WIAGRSETEQ 
IRTKLATDAL WVEQTLRFQL SVDEDMLARL GLDEAGGTAP AVLEARARAH IAANPEILSI 
VWHDAEGGIR RAVPGPADTR ADEELAAQLR RAEARARPVY ALMDGQTVTM GLRPQGSDEV 
ITATVSLPLM LERHIPWWIA EQYAVWLLDG SDSVRARRSR GTPEPEGPSH SISFDPPLPG 
AVLRITSYEG AAPFARALLP AAIAGLAAFA ILALLALYRN AQRRRAAELR LNEEMAFRRS 
MEESLTVGLR AKDHAGRVLY VNSAFCKLVG WNAEDLVGHD QPMPYWAPDR IEETLRRQRA 
LAVGGAEPQA FETRFRRSDG TEIDVQVYEA PLIDAKGMHR GWMGSIIDIT EARRAARLAR 
EQEESLARTG RLVTLGEMAS TLAHELNQPL AAIASYAAGA ANLLRQERAD PALLSSALAK 
LSHQADRAGQ IIRRIQDLVR KREPRFSALD LATVVRETAG FLEADARVRG VRIAVDVAPA 
PLVLADRILL EQLLINLMRN GIEAMGEAGA VDALTVSLRP GPARAVIEVA DRGPGIAPEV 
ADRLFDAFTS TKAEGMGIGL NICRTIVEMH RGRLTHRPRE GGGTVFRVAL PAAAEEGVAA 
E