Gene RSP_0874 details

Gene Information

• Locus tag: RSP_0874
• ID: 3718228
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodobacter sphaeroides 2.4.1
• Kingdom: Bacteria
• Replicon accession: NC_007493
• Strand: +
• Start bp: 2621697
• End bp: 2622200
• Gene Length: 504 bp
• Protein Length: 167 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 640072100
• Product: formylmethionine deformylase
• Protein accession: YP_353958
• Protein GI: 77464454
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCCGCC CCTTCGTGAT GTATCCCGAC AAGCGGCTGA AGACCGTGGC CACCCCCGTC 
GAAGCGGTGA CGGACGAGAT CCGCGCCATC TGGACCGACA TGATCGAGAC GATGGATGCG 
ATGCCGGGCT ACGGGCTGGC CGCGCCGCAG ATCGGCGTGA TGCTGCGCCT TGCGGTGGTG 
GATTGCTCGG AGAACCGCGG CAAGGCCATC CGGCTCGCCA ACCCCGAGAT CCTCCATGCC 
TCGGGGCAGT TCCGCGAGCA TGAGGAGGGC AGCCCCAACC TGCCCGGCGC CAGCGCCGTC 
ATCTCGCGGC CCCGGGCGGT CACGGTGCGC TTCCTGAATG AGGCGGGCGA GATCGAGGAG 
CGCGATTTCG TCGACATCTG GGCCACCTCG GTCCAGCATC AGATCGACCA TCTGAACGGC 
AGGCTCTATA TCGACCGCCT CTCGCCCCTG AAGCGCAAGA TGGTGGTGGC GAAGTCCGAG 
AAATACCTGC GCCGGGTGGG CTGA 

 

Protein sequence

MIRPFVMYPD KRLKTVATPV EAVTDEIRAI WTDMIETMDA MPGYGLAAPQ IGVMLRLAVV 
DCSENRGKAI RLANPEILHA SGQFREHEEG SPNLPGASAV ISRPRAVTVR FLNEAGEIEE 
RDFVDIWATS VQHQIDHLNG RLYIDRLSPL KRKMVVAKSE KYLRRVG