Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_0854 |
Symbol | |
ID | 3718320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | + |
Start bp | 2603970 |
End bp | 2604881 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640072078 |
Product | ornithine cyclodeaminase |
Protein accession | YP_353937 |
Protein GI | 77464433 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTATCG AGATCATCGG CCCGGAGGCC GAGGCCCATC TGAGCTGGGA CGGACTGACG ACGGCGCTGA CGCAGGGCCA CAAGCTGCCG CGGGCCGAGG TGGCCGACAT CTTCCTCTAC CGGGGCAAGG ACACGGTGCT GTCGCGCGCG GCCTGGATCG ACGGGCTGGG CCAGCTCGTG AAGACGGCGA CCATCTTCCC GGGCAATGGC GCGGCGGGCA AGCCCACCGT CAACGGCGCG GTGACGCTCT ATTCCGACCG CGACGGCACG CTCGAGGCGC TGGTCGATTT CCACCTCGTG ACCAAATGGA AGACGGCGGG CGACAGCCTG CTGGCGGCCA AGAGGCTCGC CCGGCGCGAC AGCCGCGAGA TCCTGCTCGT GGGCGCGGGC AATGTGGCGC GCTCGATGAT CGAGGCCTAC GGAAGCCACT TTCCCGACGC GCGCTTCACG GTCTGGAACC GGTCTGCGGA CAAGGCGCGC GCCATGGAGG GGCCGCAGGT GCGGGCGACC GAGGATCTGG AGGCGGCGGT GCGGGCGGCC GACATCATCT GCACCGCTAC GATGAGCCAG GAGCCGGTGG TGAAGGGCGA ATGGCTGAAG CCCGGCACCC ACCTCGACCT GATCGGCGCC TATCGGCCCG ACATGCGCGA GGTGGACGAC GAGGCGCTGC GGCGCGCCAC GGTCTTCGTC GATTCCCGCA AGACCACCAT CGGCCATATC GGCGAGATCC AGGACCCGCT CGACCGCGGG ATCCTTACCG AGGCCGACAT CCGGGCGGAT TACTACGATC TGGCCTCGGG CCTTTATGCC CGCCGCTCGG ACGAGGAGAT CACGCTGGCC AAGAACGGCG GCGGGGCGCA TCTCGACCTG ATGACGGCCT CCTACATCGC GGCCATGTGG CGGCAGCGCT GA
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Protein sequence | MSIEIIGPEA EAHLSWDGLT TALTQGHKLP RAEVADIFLY RGKDTVLSRA AWIDGLGQLV KTATIFPGNG AAGKPTVNGA VTLYSDRDGT LEALVDFHLV TKWKTAGDSL LAAKRLARRD SREILLVGAG NVARSMIEAY GSHFPDARFT VWNRSADKAR AMEGPQVRAT EDLEAAVRAA DIICTATMSQ EPVVKGEWLK PGTHLDLIGA YRPDMREVDD EALRRATVFV DSRKTTIGHI GEIQDPLDRG ILTEADIRAD YYDLASGLYA RRSDEEITLA KNGGGAHLDL MTASYIAAMW RQR
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