| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0842 |
|---|
| Symbol | |
|---|
| ID | 3718383 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | + |
|---|
| Start bp | 2591847 |
|---|
| End bp | 2592839 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640072064 |
|---|
| Product | putative porin |
|---|
| Protein accession | YP_353923 |
|---|
| Protein GI | 77464419 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.36378 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGA TTCTTCTTGC GACCACGGCT CTGGTGATGA CCGCTGGCGT GGCTGCGGCC
GAAATCAGCT TCTCGGGCTA CGCCGAGATG GGTGTTGTCG GCGGTGGTGA CGATGCGCCG
GCCCGCGCTG GCCACGCGGC TGGCGGCCAG ACCGAGTTCC ACAACGACTT CAACCTCATC
GTCACCATGA CGAGCGAGAC CGACACCGGC CTCGCGTTCG GCGCCAGCGT CGAGATCTCG
AAAGACGAAG GCGACTCGAA CGGCAACTTC GCTGCCGACA ACGAAGCCGC TTTCATCTCG
GGCGCCTTCG GCACCCTGAC CATGGGCGAA ATCGACGGCG CCATGGACTG GGCCATGACC
GAGAACGTGG GCAACCCCGG CACCATCGGT GACGACGAAA CCACCCACGC CGGCTACTTC
GGCGCCTACG GCGACGGCAA GTACGACAAC CAGATCGCCC GCTACGAATA CAGCTTCGGC
GACTTCGGTG TGGCGATCTC GGCCGAGCTC GACGACACCG ACACCAACGG CGACGGCTAC
GCCATCGGTG CGAAATACAA AGGCGACTTC GGCGGTTTCG GCATGGGCTT CGGCCTGGCC
TACCAGACGT TCGAAACCGA CGTGCTCGTC GGCCTCGGCA GCCAAGAAGC CGCTCTGGTC
GGCGGTGACG TCGAGCTGCT CGGCGCCTCG GTCAACGCCG ACTTCAACAA CGGCTTCGTC
GCTGGCCTCG CCTACACCGA CATCAGCTCG GACGCTCAGG ACGGCAACCA CCTCGGTCTG
TCGGCTGGCT TCACCACCGG TGCGTTCCAG ATCGGCGCCA ACTACGGTGT GTTCGACATG
GACGTGCAAG ACAAAGTCAA AGGCTGGGGC GTTGCCGCGG CTTATGACCT CGGCGGCGGT
CTGAAGCTGC ACGGCGGCTA CGGCGACTCC GACATCGACG GCGTCGACGG CGACTTCGAG
ACCTACTCGG TCGGTCTCTC GATGTCGTTC TGA
|
|---|
| Protein sequence | MKQILLATTA LVMTAGVAAA EISFSGYAEM GVVGGGDDAP ARAGHAAGGQ TEFHNDFNLI
VTMTSETDTG LAFGASVEIS KDEGDSNGNF AADNEAAFIS GAFGTLTMGE IDGAMDWAMT
ENVGNPGTIG DDETTHAGYF GAYGDGKYDN QIARYEYSFG DFGVAISAEL DDTDTNGDGY
AIGAKYKGDF GGFGMGFGLA YQTFETDVLV GLGSQEAALV GGDVELLGAS VNADFNNGFV
AGLAYTDISS DAQDGNHLGL SAGFTTGAFQ IGANYGVFDM DVQDKVKGWG VAAAYDLGGG
LKLHGGYGDS DIDGVDGDFE TYSVGLSMSF
|
|---|
| |