| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0789 |
|---|
| Symbol | cobC |
|---|
| ID | 3718405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | + |
|---|
| Start bp | 2532845 |
|---|
| End bp | 2533819 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 640072008 |
|---|
| Product | aminotransferase |
|---|
| Protein accession | YP_353867 |
|---|
| Protein GI | 77464363 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
|---|
| TIGRFAM ID | [TIGR01140] L-threonine-O-3-phosphate decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGATC ACGGCGGCAA TCTCGACAGC GCGGCGGCGC TCTTTGGCGG GGCGGTCGAG
GACTGGCTCG ACCTCTCGAC GGGGATCAAC CGGGTGCCCT ATCCGATGCC GCGCCTGCCC
GCCCGCGCGC TGACCGCCCT GCCCGATGCA GCGGCCGAGG CGCGCCTTCT GGCCGCGGCG
CGCGTGGCCT TCCGCACAGA GGCGCCGATG CTGGCCGTGG CCGGGGCACA GGCGGCGATC
CAGCTCGTGC CGCGGCTCAC CCCGCCCGGA CGGGCGCGCG TCCTTGGCCC CACCTACAAC
GAACATGCGG CAAGCCTCCG CGCCGCGGGC TGGCAGGTCG AGGAGGTGAG CGAGCTTGCG
GCGCTCGAAG GCGCCGATCT CGCCGTGCTC GTCAATCCGA ACAACCCCGA CGGCCGCCGC
CACCCGCCCG AAACCCTCCG GGCGCTCCTG CCCCGCGTGG GCCGGCTTCT GGTGGACGAA
AGCTTCGGCG ATCCGCTGCC CGATCTGTCG CTCGCTCCCG AGGCCGGCGT GCCGGGGCAT
CTGGTGCTGC GCTCCTTCGG CAAGTTCTAC GGGCTGGCGG GGCTGCGGCT GGGCTTCGTG
CTGGGAAGTG CAGAGGATGT GGCGGCGCTG GCGCGGATGG CGGGGCCGTG GGCGGTCTCG
GGCCCGGCCA TCGCCGCGGG AACCGTGGCC CTGGCCGACC GAGATTGGGC GGAGACCACG
ACCGCGCGGC TCGAGGCCGA GGGGCCGCGG CTCGATGCGC TGGCCGCCCG GATGGGCTGG
CGGCTGGCGG GCGGGGCGCA TCTCTTCCGG CTCTACGACA CGCCGGATGC CCGTGCGGCG
CAGGATCACC TCGCCCGCGC CCGGATCTGG AGCCGGATCT TCCCCTGGTC GGACCGGCTG
ATCCGCCTCG GCCTGCCGGG TGGCGAAGCG GAATGGGCGC GCCTCGACGC GGCCTTCGGC
GAAGGGATGC GGTAG
|
|---|
| Protein sequence | MRDHGGNLDS AAALFGGAVE DWLDLSTGIN RVPYPMPRLP ARALTALPDA AAEARLLAAA
RVAFRTEAPM LAVAGAQAAI QLVPRLTPPG RARVLGPTYN EHAASLRAAG WQVEEVSELA
ALEGADLAVL VNPNNPDGRR HPPETLRALL PRVGRLLVDE SFGDPLPDLS LAPEAGVPGH
LVLRSFGKFY GLAGLRLGFV LGSAEDVAAL ARMAGPWAVS GPAIAAGTVA LADRDWAETT
TARLEAEGPR LDALAARMGW RLAGGAHLFR LYDTPDARAA QDHLARARIW SRIFPWSDRL
IRLGLPGGEA EWARLDAAFG EGMR
|
|---|
| |