Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_0777 |
Symbol | LolE |
ID | 3718143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | - |
Start bp | 2519373 |
End bp | 2520659 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640071996 |
Product | ABC lipoprotein efflux transporter, inner membrane subunit, LolE |
Protein accession | YP_353855 |
Protein GI | 77464351 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGACC GGACGCGGCC CTTTGCGGCC TTCGAATGGA TGATCGCCTG GCGCTATCTG CGCGCCCGCC GCGCCGAGGG CGGCGTCTCG GTCATGACCT GGATCAGCCT CGTGGGGATC ACGCTCGCCG TCTTCGCGCT GATCGCGACG CTCTCGGTCC GCGCGGGCTT CCGCGCCGAG TTCGTGGACA CGATCCTCGG CGCGAATGCC CATGTCACCG TCTATTCCGC CGGCCGCATC ACCGAGACGG GCCAGCTGAT CCGCGGTTTC GAGGACTACG ATCCGGTGGC CGCGCGCGTG GCCGCCGTGC CGGGCGTGCT GCGGGCGGCG CCGGTGGTGA AGGGGCAGGT GATGGCCACC GCCAATGGCG CCTCCTCGGG GGTCGAGGTG TTCGGGATGC GGCAGGCCGA CCTTGCCACC ATCCCGCGCA TCGGCATCGG GGCCGAGCAT GTGGGAGACA TCGAGCGTTT CGACGAGGGC ATCGCGCTCG GCTCGGGCGT GGCGCAGGAG CTGGGAGTGA GCGTGGGCGA CCGCGTGCGG CTGATCTCGC CCGACGGGGT GAAGACGGCC TTCGGCACCT CGCCCCGCGT CTCGGCCTAC GAGGTGGTCT ATGTCTTCAC CGCCGGGCGG TACGACATCG ACCGCACCCG GGTCTACATG CCGCTCGCCG AGGCGCAGAG CTACTTCAAC CGCGAGGGCC TCGCCGACGA GATCGAGGTG ATGGTCGAGG ATCCCGAGGC GGTGGATGCG ATGGCGCCCG CGCTGATGCA GGCGGCGGGC GAGGGCTCGA TGCTCTGGAC CTGGCGCGAT TCGGCGGGCT CGTTCCTGCG CGCCCTGACC ATCGAGGACA ATGTGATGTT CGTGATCCTG TCGATCCTCG TGCTGATCGC CTCGATGAAC ATCGTCTCGG GGCTCATCAT GCTGGTGAAG AACAAGGGCC GCGACATCGG CATCCTGCGC ACCATGGGGC TGACCGAGGG CTCGATCCTG CGGGTCTTCT TCCTCTGCGG CGCCTCGACC GGGCTGATCG GCACGGCGGC GGGGGTGGCG CTGGGCTGTC TCTTCACGAT CTACATCGAT CCGATCTTCT CGCTCGTGAA CTACCTCTCG GGAGGCGGCG TCTGGGATCC CTCGATCCGC GGCATCTATG CGCTGCCCGC GAAGCTGCAA TGGGCGGATG TCTTGTCGGC GGTGGCGCTG TCGCTGGGCC TGTCCTTCTT CGTCACGCTG ATCCCTGCGC GCCGTGCGGC CCGCATGAAC CCGGTCGAGG CGCTGCGCTA TGAGTGA
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Protein sequence | MADRTRPFAA FEWMIAWRYL RARRAEGGVS VMTWISLVGI TLAVFALIAT LSVRAGFRAE FVDTILGANA HVTVYSAGRI TETGQLIRGF EDYDPVAARV AAVPGVLRAA PVVKGQVMAT ANGASSGVEV FGMRQADLAT IPRIGIGAEH VGDIERFDEG IALGSGVAQE LGVSVGDRVR LISPDGVKTA FGTSPRVSAY EVVYVFTAGR YDIDRTRVYM PLAEAQSYFN REGLADEIEV MVEDPEAVDA MAPALMQAAG EGSMLWTWRD SAGSFLRALT IEDNVMFVIL SILVLIASMN IVSGLIMLVK NKGRDIGILR TMGLTEGSIL RVFFLCGAST GLIGTAAGVA LGCLFTIYID PIFSLVNYLS GGGVWDPSIR GIYALPAKLQ WADVLSAVAL SLGLSFFVTL IPARRAARMN PVEALRYE
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