| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0742 |
|---|
| Symbol | |
|---|
| ID | 3718108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | - |
|---|
| Start bp | 2485743 |
|---|
| End bp | 2487431 |
|---|
| Gene Length | 1689 bp |
|---|
| Protein Length | 562 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640071961 |
|---|
| Product | acyl-CoA dehydrogenase |
|---|
| Protein accession | YP_353821 |
|---|
| Protein GI | 77464317 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTATC GTGCGCCGCT GGCCGACTTC CGCTTCCTGC TGGGCCATGT GGTGGGCCTC
GATCAGGTGG CCGCGACGGA GCGGTTCGCC GAAGCCACGC CCGAGACGGT CGAGGCCATC
CTCGCCGAGG CGGGCAAGCT CTGCGAGGAG GTGCTGGCGC CGCTGCAGCG GCCGGGCGAT
CTGCATCCGG CCCGGCTCGA GAATGGCGTC GTGCGCACCT CGCCCGGCTA TGCCGAGGGC
TACCGCGCCA TTGCGGACGG GGGCTGGGTG GGGATCGCCG CCAGCCCCGA GCATGGCGGC
ATGGGCCTGC CCATGGCGGT GACGACCGCC GTGAACGAGA TGATGTCCTC GGCCTGTCTC
TCGCTCCAGC TCAATCCGCT GCTGACGCAG GGCCAGATCG AGGCGCTGGA GCATCACGCC
TCGGATGCAC TGAAGGCGCT CTATCTGCCG AAGCTCATTT CGGGGGAGTG GAGCGGCACG
ATGAATCTGA CCGAGCCGCA GGCGGGGTCG GACGTGGGCG CGGTGCGCAC GCGGGCCGAG
CCGCTGGAGG ACGGCACCTA TGCGATCACC GGGCAGAAGA TCTACATCAC CTGGGCCGAC
ACCGACTTCA ACGCGAACGT CTGCCACCTC GTGCTGGCGC GCTTGCCGGA CGGGCCGCAG
GGCACGCGCG GGATCAGCCT CTTCCTCGTG CCGAAGTTCC TGCCCGACGC CGAGGGCCGT
CCGGGGCCGC GCAATGCGGT GACGGTGGTG AGCCTCGAGG AGAAGCTGGG CCTGCATGGC
TCTCCCACTG CCGTCATGGA TTATGACGGG GCGAAGGGCT GGCTGGTGGG CGCGCCGCAC
AAGGGGATGG CCGCGATGTT CACCATGATG AACAACGCCC GTCTCGGGGT CGGCGTGCAG
GGCGTGGGGG TGGCCGAGGC CGCGACCCAG GCGGCCGTGG CCTATGCGAT GGAGCGCCGG
CAGGGCGGGC CGGGCGGCAT CATCGAACAT GCCGACGTGC GCCGGATGCT CGCCGTGATG
AAGGCCGAGA CCTTCTCGGC GCGCGCCATC GCGCTCGCCT GTGCCGTGGC CCTCGACATG
GGCCGCGCGA CGGGCCAGCC GGAATGGCAG GCGCGGGCCG CGCTTCTCAC GCCGATCGCC
AAGGCCTACG GCACCGATGT GGGCATCGAG GTCGCCTCGA TGGGGGTGCA GGTCCATGGC
GGCACGGGCT TCATCGAGGG CACCGGCGCC GCGCAGTTCC TGCGCGACGT GCGGGTGACG
GCGATCTACG AGGGGACGAA CGGCATCCAG GCGATGGACC TCGTCGGCCG CAAGATGATG
GACGGGGGCG AGGCGGCCTT CCGCCTTCTG CAGGAGATCG AGGACGCGGC CGAGACCGCG
CGCCACAGGC TGCCCGATCT GGCCAACGAT GTCTGGGCCG CCTCCGAGGC GCTGCGCGAG
GCGACCGAGA CGCTGGTGGG CCAGGAGATG CAGGACCGGT TCGCGGGCGC GGTGCCCTAT
CTGCGCGCCT TCGCCCGCGT GCTCGGCGCG CATTTCCACC TGACGGCCGC CGTCACCGAT
CCTGCGCGCG AGCCGCTCGC GCGGGTCGCG ATCCGCCGGC TGCTTCCGGA ACATGCGGCG
CTGCTCGCAC AGGTGCGCGA GGGCGCGGCG GGGCTCTATG CGCTCTCGCC CGAGGATCTG
GCCGCGTGA
|
|---|
| Protein sequence | MPYRAPLADF RFLLGHVVGL DQVAATERFA EATPETVEAI LAEAGKLCEE VLAPLQRPGD
LHPARLENGV VRTSPGYAEG YRAIADGGWV GIAASPEHGG MGLPMAVTTA VNEMMSSACL
SLQLNPLLTQ GQIEALEHHA SDALKALYLP KLISGEWSGT MNLTEPQAGS DVGAVRTRAE
PLEDGTYAIT GQKIYITWAD TDFNANVCHL VLARLPDGPQ GTRGISLFLV PKFLPDAEGR
PGPRNAVTVV SLEEKLGLHG SPTAVMDYDG AKGWLVGAPH KGMAAMFTMM NNARLGVGVQ
GVGVAEAATQ AAVAYAMERR QGGPGGIIEH ADVRRMLAVM KAETFSARAI ALACAVALDM
GRATGQPEWQ ARAALLTPIA KAYGTDVGIE VASMGVQVHG GTGFIEGTGA AQFLRDVRVT
AIYEGTNGIQ AMDLVGRKMM DGGEAAFRLL QEIEDAAETA RHRLPDLAND VWAASEALRE
ATETLVGQEM QDRFAGAVPY LRAFARVLGA HFHLTAAVTD PAREPLARVA IRRLLPEHAA
LLAQVREGAA GLYALSPEDL AA
|
|---|
| |