Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_0696 |
Symbol | ccoN |
ID | 3718174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | - |
Start bp | 2438690 |
End bp | 2440297 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640071912 |
Product | cbb3-type cytochrome c oxidase subunit I |
Protein accession | YP_353773 |
Protein GI | 77464269 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.375098 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGGATT ACGTTAAGTT GGTCGCGCTC GGCGTGATCG CGCTGTGTGC CGCGATCGCA GCCAACTACG CGCGCGACCT CGCATACATG GTGAACGCCG TATCGGTCAT GCTGGTGGCC GGCGGCCTGT TCCTGTGGCA GGTGCGCCGG GTCGGGGACG AGGTCCGTCC GAAGCCGGCG CTTCAGACGG AATATATGGA CGGGGTCATC CGCTACGGTG TGGTGGCGAC GGCCTTCTGG GGCGTGGTGG GCTTTCTGGT GGCCGTCATC ATCGCCTTCC AGCTGGCCTT TCCCCAGCTC AACTTCGAAT GGGCGCACGG CTATCTGAAC TTCGGACGGC TGCGTCCGCT GCACACCTCC GCGGTGATCT TCGCCTTCGG CGGCAACGCC CTGATCGCGA CGAGCTTCTA TGTCGTGCAG CGCACCTCGG CCGCGCGCCT CTGGGGCGGC AACCTCGGCT GGTTCGTCTT CTGGGGCTAC AACCTGTTCA TCGTGCTCGT GGCCCAGAGC TATCTGCTCG GCGCCACCCA GTCGAAGGAA TATGCCGAGC CGGAATGGTA TCTCGACCTG TGGCTGACCA TCGTCTGGGT CTGCTATCTC GCGGCCTTCC TCGGCACGAT CATCAAGCGC AAGGAACCCC ACATCTATGT GGCCAACTGG TTCTACCTTG CCTTTATCGT CACCGTGGCG ATGCTCCACA TCTTCAACAA CCTCTCGATC CCGGTCTCGT TCTTCGGCTC GAAGTCCGTG CAGGTCTTCT CGGGCGTGCA GGACGCCATG GTGCAGTGGT GGTACGGCCA CAACGCGGTG GGCTTCTTCC TGACCGCGGG CTTCCTCGGC ATGATGTATT ACTTCGTGCC GAAGCAGGCC GAGCGTCCCG TCTACAGCTA CAAACTGTCG ATCGTGCACT TCTGGGCGCT GATCTTCCTC TATATCTGGG CCGGTCCGCA CCACCTGCAC TACACGGCGC TGCCGACCTG GACCTCGACC CTCGGCATGG TGTTCTCGAT CATGCTCTGG ATGCCGTCCT GGGGCGGGAT GATCAACGGC CTGATGACGC TCTCGGGCGC CTGGGACAAG CTGCGCACCG ATCCGATCAT CCGCATGATG GTCGTCTCGA TCGGCTTCTA CGGCATGTCG ACCTTCGAGG GCCCGATGAT GTCGATCAAG GCCGTGAACT CGCTCAGCCA TTACACCGAC TGGACCATCG GTCACGTCCA TTCCGGCGCG CTCGGCTGGA ACGGCATGAT CACCTTCGGC GCGCTCTACT TCCTCACGCC GAAACTGTGG AACAAGGAAC GGCTCTACAG CCTCAGCCTC GTCTCCTGGC ACTTCTGGCT CGCCACCATC GGCATCGTGC TCTACGCCTC GTCGATGTGG GTCTCGGGCA TCATGGAAGG CCTGATGTGG CGGGAAGTGG ATGCGAACGG CTTCCTCGTG AACGCCTTCG CCGACACGGT GGCTGCCAAG TTCCCGATGA ACGTGGTGCG GGGTCTCGGC GGGGTGCTCT ACCTCACCGG TGCGCTCATC ATGTGCTACA ACCTGTGGAA AACCGTGACC AGCGCCCCCT CGCGGGTGGT GCGCGCCGCG GCCGTTCCCG CTGAGTGA
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Protein sequence | MWDYVKLVAL GVIALCAAIA ANYARDLAYM VNAVSVMLVA GGLFLWQVRR VGDEVRPKPA LQTEYMDGVI RYGVVATAFW GVVGFLVAVI IAFQLAFPQL NFEWAHGYLN FGRLRPLHTS AVIFAFGGNA LIATSFYVVQ RTSAARLWGG NLGWFVFWGY NLFIVLVAQS YLLGATQSKE YAEPEWYLDL WLTIVWVCYL AAFLGTIIKR KEPHIYVANW FYLAFIVTVA MLHIFNNLSI PVSFFGSKSV QVFSGVQDAM VQWWYGHNAV GFFLTAGFLG MMYYFVPKQA ERPVYSYKLS IVHFWALIFL YIWAGPHHLH YTALPTWTST LGMVFSIMLW MPSWGGMING LMTLSGAWDK LRTDPIIRMM VVSIGFYGMS TFEGPMMSIK AVNSLSHYTD WTIGHVHSGA LGWNGMITFG ALYFLTPKLW NKERLYSLSL VSWHFWLATI GIVLYASSMW VSGIMEGLMW REVDANGFLV NAFADTVAAK FPMNVVRGLG GVLYLTGALI MCYNLWKTVT SAPSRVVRAA AVPAE
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