| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0680 |
|---|
| Symbol | hemE |
|---|
| ID | 3718330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | + |
|---|
| Start bp | 2424282 |
|---|
| End bp | 2425313 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640071896 |
|---|
| Product | uroporphyrinogen decarboxylase |
|---|
| Protein accession | YP_353757 |
|---|
| Protein GI | 77464253 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
|---|
| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGA CGATGCTGCG TGCGCTGAAG GGCGAGACGC TGCCCACGCC TCCCATCTGG
CTCATGCGTC AGGCGGGGCG CTATCTGCCG GAATACCGCG CCACGCGCGC CCAGGCGGGG
GACTTCCTCT CGCTCTGCTA CACGCCGGAT CTCGCGGCGG AAGTGACGCT CCAGCCGATC
CGTCGCTACG GGTTCGACGC GGCGATCCTC TTTGCCGACA TCCTGCTCCT GCCGCAGGCG
CTGGGGGCGG ACCTGTGGTT CGAAACCGGC GAAGGGCCGC GCATGTCGAC CATCACCGAC
ATGGCGGGCG TGACCGCGCT GAAGGGCCGC GACGACATCC ACGAGACGCT CGCGCCGGTC
TATGAGACCT GCCGCATCCT CGCCCGCGAA CTTCCCAAGG AGACAACCTT CATCGGCTTT
GCGGGCATGC CCTGGACGGT CGCGACCTAC ATGATCGCGG GCCGCGGCAG CAAGGATCAG
GCCGCTGCGC ACAAGCTGAA GGACACCGAC CGTCCCGCCT TCGAAGCGCT GATGGACCGC
GTGACCGAGG CCACCATCGA ATATCTCGCC AAGCAGGTCG AGGCCGGCTG CGAGGTGGTG
AAGCTCTTCG ACAGCTGGGC CGGCTCGCTG AAGGGCCAGG ACTTCGAGGA TTTCGCCGTG
GCCCCCGCCA AGCGGATCGT CTCGGAACTC AAGGCCCGCT TCCAGGGCCT GCCGGTCATC
GCCTTCCCGC GCGAGGCGGG CGAGGGCTAC ATCGGTTTCG CCGAGAAGAC CGGGGCCGAC
TGCGTGGCCA TCGACAATTC CGTCAGCCCG GAATGGGCGG CCGAGAAGGT GCAGGCGGGC
CGGACCTGCG TGCAGGGCAA CCTCGATCCG AAATACATGG TGACGGGCGG CGAGGAACTG
GTGCAGGCCA CGAAACGTGT GGTCGAGGCG TTCCGGAACG GCCCGCACAT CTTCAACCTC
GGCCATGGCA TCACGCCCGA GGCCGATCCC GAGAACGTGA CGCTGCTCGT CGAGACGATC
CGCGGCAAGT GA
|
|---|
| Protein sequence | MTKTMLRALK GETLPTPPIW LMRQAGRYLP EYRATRAQAG DFLSLCYTPD LAAEVTLQPI
RRYGFDAAIL FADILLLPQA LGADLWFETG EGPRMSTITD MAGVTALKGR DDIHETLAPV
YETCRILARE LPKETTFIGF AGMPWTVATY MIAGRGSKDQ AAAHKLKDTD RPAFEALMDR
VTEATIEYLA KQVEAGCEVV KLFDSWAGSL KGQDFEDFAV APAKRIVSEL KARFQGLPVI
AFPREAGEGY IGFAEKTGAD CVAIDNSVSP EWAAEKVQAG RTCVQGNLDP KYMVTGGEEL
VQATKRVVEA FRNGPHIFNL GHGITPEADP ENVTLLVETI RGK
|
|---|
| |