| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0649 |
|---|
| Symbol | thiM |
|---|
| ID | 3718298 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | - |
|---|
| Start bp | 2387751 |
|---|
| End bp | 2388539 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640071863 |
|---|
| Product | putative hydoxyethylthiazole kinase |
|---|
| Protein accession | YP_353724 |
|---|
| Protein GI | 77464220 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2145] Hydroxyethylthiazole kinase, sugar kinase family |
|---|
| TIGRFAM ID | [TIGR00694] hydroxyethylthiazole kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.223409 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACGGCT GCGGAACCTA TCTCGACACC ATGCGGCGCG AGGCGCCGCT GGTGCAATGC
ATCACCAATT TCGTCGCCAT GAATGTCGTG GCCAACGTGC TTCTGGCGGC GGGTGCCTCG
CCCGCGATGG TGCATGACGC CGAGGAATCC GGCGAGTTCG CCGCCATTGC GCAGGCGCTG
ACGATCAACA TGGGCACGCC GAGCCCCCGC TGGGTCGAGG GGATGGAGGC CGCGGCGCGT
GGTGCTGCGG CGGCCGGGCG GCCCTGGGTG CTCGATCCGG TGGCGGTGGG CGCCACGGCC
TTCCGCCGCG GCCTCGGTGC CCGGCTTCTG GCGCTGAAGC CCACCGTCAT CCGCGGCAAT
GCCTCGGAAA TCCTCGCGCT GGCAGGGGCC GAGACCCGGG GCAAGGGCGC TGACAGCGCC
GATCCGGTCG CGGCCGCCGA GGCGGCGGCG CAGCGCCTTG CCGAAAGCTC GGGCGCGGTG
GTCGCGGTGA CGGGGCCGGT GGATTTCGTG ACCGACGGCC GGCGCGGCAT CCGCTGCGCC
AACGGCCATC CGCTCATGCC GCGGGTGACC GCGCTCGGCT GCTCGCTGAC CGGGATCGTG
GGCGCCTTCG CGGCGACCCG GCCGCCGTTC GAGGCGACGG CGGCGGCGCT CGCCTTCTTC
GGGCTCGCGG GCGAAGAGGC CGCAAAGACA GCGACCGGGC CCGGCAGCTT CCAGGTGGCT
TTCCTCGACG CGCTCCACAC CCTGTCGCCC GAGGCGCTCG ACCGTGGCGC CAGGCTGGAG
GCCGCATGA
|
|---|
| Protein sequence | MDGCGTYLDT MRREAPLVQC ITNFVAMNVV ANVLLAAGAS PAMVHDAEES GEFAAIAQAL
TINMGTPSPR WVEGMEAAAR GAAAAGRPWV LDPVAVGATA FRRGLGARLL ALKPTVIRGN
ASEILALAGA ETRGKGADSA DPVAAAEAAA QRLAESSGAV VAVTGPVDFV TDGRRGIRCA
NGHPLMPRVT ALGCSLTGIV GAFAATRPPF EATAAALAFF GLAGEEAAKT ATGPGSFQVA
FLDALHTLSP EALDRGARLE AA
|
|---|
| |