Gene RSP_0607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_0607 
Symbol 
ID3718235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007493 
Strand
Start bp2347737 
End bp2348597 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content65% 
IMG OID640071819 
ProductRNA polymerase sigma factor SigJ 
Protein accessionYP_353682 
Protein GI77464178 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGCCTG ACGTCTACCT GCAGATTTTC GAGACGCGGC GGCCCCAGCT GCTGCGTCTT 
GCTTATCGGA TGCTGGGCTC CCATGCCGAG GCCGAAGATG TGGTACAGGA GGCATGGATC
CGCTGGCAGG CCGCCGATCA GGCACAGATC GCCATCCCGG CGGCTTGGTT GAACCGGGTG
GTGTCGCGCC TCTGTCTGGA CCTGATGCGC TCGGCCCGGC ACCGTCGCGA GAGCTACATC
GGGCCTTGGC TGCCCGAACC GCTGATTGAA GAGGAGGATG CCGATCACCG CCCGGACAAC
CTGACCCTGT CGCTGATGAT GGCGCTGGAG CGGCTGTCCC CGCTGGAGCG TGCCGCCTTC
CTTCTGCATG ACGTCTTCGG CCAGTCCTTC GATGAGGTGG CGCTGGCCCT CGACCGCTCA
CCTTCAGCGG CACGCCAGCT GGCGGTGCGC GCGCGGGCAC ATGTCCATAT CGACCGCCCG
CGCTACAAGG TGGAGCGCGA GGCAGCGGAA GGCCTGACCC GCGCCTTCTT CGAGGCCTGC
AAGACGGGCG ATGCGGCGGT TCTGTCGGGC CTCTTGGCCG AAGACGCGGT GCTGCATTCG
GACGGTGGCG GCAAGGTCTA CAACCTGCTG AACGTGATCG TGGGCGCCCA AAAGCTGCTG
CGGATGTTCA CCAGTCTGTC GCGCAAGCGG GGGGACGAGA TGGAATTCGT GCAATTCACC
TTGATCGACG CTCTTCCCGG CTATGTCTGG CGAATGGGAG ACCAGATCCA GACCACCGCG
CTGGAGGTCG AGGACGGCCG CATCACCCGG GTCTACACGA CACGCAATCC CGACAAGCTG
ACCCGTATCA GGCTCAACTG A
 
Protein sequence
MSPDVYLQIF ETRRPQLLRL AYRMLGSHAE AEDVVQEAWI RWQAADQAQI AIPAAWLNRV 
VSRLCLDLMR SARHRRESYI GPWLPEPLIE EEDADHRPDN LTLSLMMALE RLSPLERAAF
LLHDVFGQSF DEVALALDRS PSAARQLAVR ARAHVHIDRP RYKVEREAAE GLTRAFFEAC
KTGDAAVLSG LLAEDAVLHS DGGGKVYNLL NVIVGAQKLL RMFTSLSRKR GDEMEFVQFT
LIDALPGYVW RMGDQIQTTA LEVEDGRITR VYTTRNPDKL TRIRLN