| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0601 |
|---|
| Symbol | rpoH2 |
|---|
| ID | 3718015 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | - |
|---|
| Start bp | 2342488 |
|---|
| End bp | 2343366 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640071812 |
|---|
| Product | RNA polymerase factor sigma-32 |
|---|
| Protein accession | YP_353676 |
|---|
| Protein GI | 77464172 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
|---|
| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.907617 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTGG ACGGATATAC CGATCAAACG ATGTCGCGCC AAGCGATGAG GGCGGAGCTT
CTGGACGCAG AGACGGAGCT GCGCCTCGCC TATGCCTGGC GGGACCAGCG CGACGAGCGG
GCGCTCCACC GTCTGATCAC CGCCTACATG CGCCTTGCGA TCTCGATGGC CTCGAAATAC
CGCCGCTACG GCGCGCCGAT GAACGACCTG ATCCAGGAGG CGTCGCTCGG GCTGATGAAG
GCCGCCGACA AGTTCGATCC CGACCGCGGC GTGCGCTTTT CGACCTATGC CGTCTGGTGG
ATCAAGGCCT CGATCCAGGA TTACGTCATG CGGAACTGGT CTCTGGTGCG GACCGGCTCC
ACCTCCAGCC AGAAGGCGCT GTTCTTCAAC ATGCGCCGGG TGCAGGCCCG GCTCGAGCGC
GAGGCCTCGC AACGGGGCGA AGCGCTCGAT GCGCATCAGC TGCGCGAGAT GGTGGCTCAT
GACGTGGGCG TGCCGCTCTC GGATGTCGAG ATGATGGAGG GGCGGCTCTC GGGCTCGGAC
TTCTCGCTCA ACGCCACCCA GTCGGCCGAT GACGAGGGGC GGGAGTGGAT CGACGCGCTC
GAGGACGATT CGGCACAGGC GGCCGAGGTG GTGGAGGGCT CGCTCGATGC CGCGCGGCTG
CGGGGCTGGC TGGTGTCGGC CATGCAGCAG CTGAACGCGC GCGAGCGGTT CATCGTGACC
GAACGCAAGC TGCGCGACGT GCCCCGGACG CTCGAAAGCC TCGGCGAAGA ACTGAAGCTT
TCCAAGGAGC GGGTGCGGCA GCTTGAAGCA GCGGCCTTTG CGAAGATGCG GCGGAGCCTT
GAAGCCCAGT CGCGGGAGGT GCATCACTTC CTCCTATGA
|
|---|
| Protein sequence | MALDGYTDQT MSRQAMRAEL LDAETELRLA YAWRDQRDER ALHRLITAYM RLAISMASKY
RRYGAPMNDL IQEASLGLMK AADKFDPDRG VRFSTYAVWW IKASIQDYVM RNWSLVRTGS
TSSQKALFFN MRRVQARLER EASQRGEALD AHQLREMVAH DVGVPLSDVE MMEGRLSGSD
FSLNATQSAD DEGREWIDAL EDDSAQAAEV VEGSLDAARL RGWLVSAMQQ LNARERFIVT
ERKLRDVPRT LESLGEELKL SKERVRQLEA AAFAKMRRSL EAQSREVHHF LL
|
|---|
| |