| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0576 |
|---|
| Symbol | |
|---|
| ID | 3718028 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | - |
|---|
| Start bp | 2316462 |
|---|
| End bp | 2318279 |
|---|
| Gene Length | 1818 bp |
|---|
| Protein Length | 605 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640071787 |
|---|
| Product | Na+/solute symporter |
|---|
| Protein accession | YP_353651 |
|---|
| Protein GI | 77464147 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4147] Predicted symporter |
|---|
| TIGRFAM ID | [TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCAAT TCACTCTCAA CCTGATCGTG GTCGGCATCA CCTTTGCCAT CTACATCGGG
ATTGCGATCT GGGCCCGGGC GGGTTCGACC GCAGAGTTCT ATGCCGCCGG TCAGGGCGTG
CACCCGGTCA TGAACGGCAT GGCCACGGGC GCGGACTGGA TGTCGGCGGC CTCCTTCATC
TCGATGGCGG GCATCATCGC GCTCGCCCCG GCCGGCGGCT ACACCCAGTC GGCCTTCCTC
ATGGGCTGGA CCGGCGGCTA TGTGCTTCTG GCCCTGCTGC TCGCGCCCTA CCTGCGCAAG
TTCGGCAAGT TCACCGTGCC GGAATTCATC GGGGACCGCT TCTATTCGGG CGGCGCCCGG
CTTCTGGCGG TGGTCTGCCT CATCATCATC TCGATCACCT ATGTGATCGG GCAGATGCGC
GGCGTGGGCG TGACCTTCGG GCGCTTCCTC GAGATCTCGA CCGACATGGG TCTCTACATC
GGCGCGGCGA TCGTCTTCGC CTATGCCGTG TTCGGCGGCA TGAAGGGCAT CACCTACACG
CAGGTGGCCC AGTATGTCGT GCTCATCATC GCCTACACGA TCCCCGCGAT CTTCATCTCG
CTCGCGCTGA CGGGGGCCTT CCTGCCGCAG CTCGGCCTGA TCGGCGACTA TGCGCCCGCG
GGCGGCGACC AGGCGTTCCT CGCCAAGCTC GACCAGGTGG TCACGGAACT GGGCTTCACC
GCCTACACCG CCGATACGCC CTCGATGCTG AACATGTTCC TCTTCACCAT GTCGCTGATG
ATCGGCACCG CGGGCCTGCC GCACGTCATC ATCCGCTTCT TCACCGTGCC GAAGGTGGCC
GACGCCCGTT CCTCGGCCGG CTGGGCGCTC GTCTTCATCG CGCTCCTCTA TACCGTCGCT
CCGGCCGTGG GCTCGATGGC GCGCCTGAAC CTGACCACCA CCATGTGGCC CGGCGCCGTG
ACGGGCAATG CGCTGGATGC CGATGCGATC TCGGTCGAGG CGATCCAGAC CGATCCGCGC
CTGAACTGGG TGAAGACCTG GGAACAGACC GGCCTGCTCG TGATGGAAGA CCTGAACGGC
GACGGCAAGA TCCAGTACTA CAACGACAAG AACCCGGCGA TGGCCGAGGT GGCCGCCGAG
CGCGGCTGGG CCGGCAACGA AGTCACCAAG ATCGACAACG ACATCATGGT GCTCGCCAAC
CCCGAGATCG CGGCCCTTCC GGGCTGGGTG ATCGCGCTCG TGGCCGCCGG CGCGCTGGCT
GCCGCCCTCT CGACCGCGGC GGGCCTGCTG CTCGCCATCT CGTCTGCGAT CTCGCACGAC
CTCATCAAGG GGTCGATCAA CCCGAACATC TCGGAGAAGG GCGAGCTTCT GGCCGCGCGG
ATCTCGATGA CCGGCGCGAT CGCGATCGCC ACCTGGCTCG GCCTCAACCC GCCCGGCTTT
GCCGCGCAGG TGGTGGCACT GGCCTTCGGT CTGGCCGCCG CGACGATCTT CCCGGCGCTG
ATGATGGGGA TCTTCTCGAA GCGCGTGAAC AAGGAAGGCG CGATCCTCGG GATGCTCGTC
GGCCTGATCT TCACCGCGGT CTACATCTTC CTCTACAAGG GCTGGTTCTT CATCCCCGGC
ACCGCGATGT ATGAAGACGT TCCCGCCAAC TACTTCTTCG GCATCTCGCC GCTGTCGATC
GGCACCATCG GCGCCATCCT GAACTTCGCC GTGGCCTTCG GGGTCTCGGC GGTGACGAAG
GCTCCGCCGC GTCAGGTGGT CGATCTGGTC GAAAGCATCC GCATTCCGCG CGGTGCCGGC
AAGGCCACGG CCCACTGA
|
|---|
| Protein sequence | MDQFTLNLIV VGITFAIYIG IAIWARAGST AEFYAAGQGV HPVMNGMATG ADWMSAASFI
SMAGIIALAP AGGYTQSAFL MGWTGGYVLL ALLLAPYLRK FGKFTVPEFI GDRFYSGGAR
LLAVVCLIII SITYVIGQMR GVGVTFGRFL EISTDMGLYI GAAIVFAYAV FGGMKGITYT
QVAQYVVLII AYTIPAIFIS LALTGAFLPQ LGLIGDYAPA GGDQAFLAKL DQVVTELGFT
AYTADTPSML NMFLFTMSLM IGTAGLPHVI IRFFTVPKVA DARSSAGWAL VFIALLYTVA
PAVGSMARLN LTTTMWPGAV TGNALDADAI SVEAIQTDPR LNWVKTWEQT GLLVMEDLNG
DGKIQYYNDK NPAMAEVAAE RGWAGNEVTK IDNDIMVLAN PEIAALPGWV IALVAAGALA
AALSTAAGLL LAISSAISHD LIKGSINPNI SEKGELLAAR ISMTGAIAIA TWLGLNPPGF
AAQVVALAFG LAAATIFPAL MMGIFSKRVN KEGAILGMLV GLIFTAVYIF LYKGWFFIPG
TAMYEDVPAN YFFGISPLSI GTIGAILNFA VAFGVSAVTK APPRQVVDLV ESIRIPRGAG
KATAH
|
|---|
| |