| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0560 |
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| Symbol | priA |
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| ID | 3717953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | - |
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| Start bp | 2296841 |
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| End bp | 2299033 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640071770 |
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| Product | primosome assembly protein PriA |
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| Protein accession | YP_353634 |
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| Protein GI | 77464130 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.926963 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACAGGTC GCTTCGCAGA GGGCGCACGG GTGGGCGTTC TGACCACCGA GCCGCTGGGC
CGCGTGCTCG ATTATCGCGC GCCCGAAGGG GGCTGCGATT TGGGCGACTA TGTGGTCGTG
CCGCTCGGGC CGCGCCGGGT GATGGGGGTG GTCTGGGGGC CGGGCGAGGG CGGCTTCGAT
GCGGCGAAGC TCCGCGGGAT CGAGCGGGTG CTCGACGCGG CGCCCATGCG CGAGGAGATG
CGGCTCTTTC TGGCGCGGGC GGCCGACTAC ACCCTGACCC CTTTGCCCGC GATGCTGCGG
CTCGCGAGCC GCGCGCCGGG TCTGGGCGAG CCGCCGGCGG TGCGGCGCGT CTACCGCGCC
TCCGGCCACG AGCCCGCGCG CCTGACCGAG CCGCGCCAGC GGGTGCTCGA CGCGCTGGCC
GCCTATGGCG GAGCGCCGGT GACGCTCGCT GAGCTGTCGG CCGAAGCGGG GGTGACGGGC
TCGGTGGTGA AAGGGCTGGT CAAGGCGGGC GCGATCCTCG AGGAGGAGGC GCCGCGCGAC
CTGCCCTATC CGCCGCTCGA TCCCGGTGCC GCGCCCGTGC GGCTCGAGGG CGATCAGGTG
GCGGCAGCCG AGGCTCTTGT CGCGGCGGTG GCGGCCGACA GCTACAGCAC GACGCTTCTG
AAGGGCGTGA CCGGCTCGGG CAAGACCGAG GTCTATCTCG AGGCGGTGGC CGAGTGCCTG
CGCCGCGGCC GGCAGGCGCT CGTGCTCCTG CCCGAGATCG CGCTCACCTC GGAATTCCTC
GCCCGCGTCG AGGCCCGTTT CGGCGCGCGA CCCGCCGAAT GGCACTCGGG CGTGACCGCG
ACCGAGCGGC GGCGGCTCTG GCGGATGGTG TCCGAGGGGC AGGCGCAGTT CGTGGCGGGG
GCCCGGTCGG CCCTGTTCCT GCCCTTCCGC GACCTCGGCC TCGTCGTCGT CGACGAGGAG
CACGACACCT CCTACAAGCA GGAGGAGGGC GCGCTCTACA ATGCGCGTGA CATGGCGGTG
CTGCGCGCCT CGATCTGCGG CTGCCCGGCG GTGCTGGCCT CGGCCACGCC CTCGCTCGAA
AGCTGGGTGA ATGCCGCGCA GGGCCGCTAT GCGCGTCTCG ACCTCGGTGC CCGCTTCGGC
GCGGCCGAGC TGCCCGAGAT GCATGCGATC GACCTGCGCC CCGAGAAGCT GCCCGCGAAC
CGCTGGATCT CGGAGGCTCT GGCCCGATCG GTCGAGGCCC GGATCGCGCG GGGCGAGCAG
TCGCTCCTGT TCCTGAACCG CCGCGGCTAT GCGCCGGTCA CGATCTGCCG CGCCTGCGGC
CACCAGATCG GCTGCGACCA TTGCGATGCG CGGATGGTCG AGCACCGCTT CCAGAAGCGC
CTCGTCTGCC ACCAGTGCGG CGCGACGAAG CCCATGCCCG AGGCCTGCCC CTCCTGCGGG
GTCGAGGGGC GGATGGCGCC GGTGGGACCC GGGGTCGAGC GGCTGGCCGA GGAGGTGGCC
GAGCGCTTTC CGCAGGCGCG GGTGGCGGTG CTGTCCTCGG ACCTCTTCGG CTCGGCGCGG
GCGGTGAAGG AGCAGATCGC GGCCATCGCC GAGGGCGGGG CCGACATCAT CATCGGCACG
CAGATCGTGG CCAAGGGGCA CAACTTCCCG CTCCTGACGC TGGTGGGCGT GATCGATGCG
GATCTGGGTC TGCAGGGATC GGACCTGAGG GCTGCCGAGC GCACCTTCCA GCTGGTGCGG
CAGGTGGCAG GGCGCGCCGG GCGCTCGGCG AGCCGGCGGG GCGTGGCGCT CGTGCAGACC
TGCCAGCCCG AACACCCCGT GATCCGGGCG ATCCTCGGCG GCGACGAGGA AGCCTTCTGG
AGGGCCGAGG CCGAGGAGCG GCGCGTGGCG GGGATGCCGC CCTACGGGCG CCTTGCGGGC
ATCATCCTGT CCTCGCCCGA TGTGGCGCAG GTCTTCGAGA CGGGCGCGGA GCTTGCCCGG
GCCGACGGCC CCCTGCGCCG GATCGGGGCG CAGGTCTTCG GCCCCGCGCC CGCGCCCATC
GCCCGGGTGC GGGGCCGCCA CCGGGTGCGC CTGCTGGTCA AGGCGGGGAA GGGCGCGCCG
CTGCAGGCCG CGCTCGCGGA ATGGATCGCG CAGGTGAAGC TGCCCGCGAA CCTGCGACTC
GCGGTGGACA TCGATCCGCA GAGCTTCCTC TGA
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| Protein sequence | MTGRFAEGAR VGVLTTEPLG RVLDYRAPEG GCDLGDYVVV PLGPRRVMGV VWGPGEGGFD
AAKLRGIERV LDAAPMREEM RLFLARAADY TLTPLPAMLR LASRAPGLGE PPAVRRVYRA
SGHEPARLTE PRQRVLDALA AYGGAPVTLA ELSAEAGVTG SVVKGLVKAG AILEEEAPRD
LPYPPLDPGA APVRLEGDQV AAAEALVAAV AADSYSTTLL KGVTGSGKTE VYLEAVAECL
RRGRQALVLL PEIALTSEFL ARVEARFGAR PAEWHSGVTA TERRRLWRMV SEGQAQFVAG
ARSALFLPFR DLGLVVVDEE HDTSYKQEEG ALYNARDMAV LRASICGCPA VLASATPSLE
SWVNAAQGRY ARLDLGARFG AAELPEMHAI DLRPEKLPAN RWISEALARS VEARIARGEQ
SLLFLNRRGY APVTICRACG HQIGCDHCDA RMVEHRFQKR LVCHQCGATK PMPEACPSCG
VEGRMAPVGP GVERLAEEVA ERFPQARVAV LSSDLFGSAR AVKEQIAAIA EGGADIIIGT
QIVAKGHNFP LLTLVGVIDA DLGLQGSDLR AAERTFQLVR QVAGRAGRSA SRRGVALVQT
CQPEHPVIRA ILGGDEEAFW RAEAEERRVA GMPPYGRLAG IILSSPDVAQ VFETGAELAR
ADGPLRRIGA QVFGPAPAPI ARVRGRHRVR LLVKAGKGAP LQAALAEWIA QVKLPANLRL
AVDIDPQSFL
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