Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_0554 |
Symbol | htpx |
ID | 3717947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | - |
Start bp | 2291924 |
End bp | 2292826 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640071764 |
Product | heat shock protein HtpX |
Protein accession | YP_353628 |
Protein GI | 77464124 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGATACG TTCGCACAGG CATCCTGATG GCGGTCATGA CGGCGCTGTT CCTCGGCGTC GGGGCGCTCA TCGGCGGGCA GAGCGGCGCG ATCATCGCGC TCGTGATCGC CGCGGGCATG AACCTCTTCA CCTTCTGGAA TTCGGACCGG GCCGTGCTCT CGATGCATGG CGCGCATGAG GTGGACCCGC GCGCGGCCCC GGATCTCTAC AACATGGTCC GGGGGCTGGC CGACCGGGCC GGGATGCCGA TGCCGAAGCT CTATCTGATC GAGACCGACC AGCCCAACGC CTTCGCCACC GGGCGCAACC CCGAGAATGC TGCGGTGGCG GTCACGCGGG GCCTTCTGCG GGCGCTGACC CCGGAAGAGG TGGCGGGCGT GGTGGCGCAC GAGCTCGCCC ATATCCGGAA CCGCGACACG CTGCTGATGA CCGTGACCGC GACCTTCGCC GGCGCGATCT CGATGCTCGC CAACTTCGCC TTCTTCTTCG GCGGCAGCTC GAACGAGGAG GGCGAGCGGC CGATGGGCCT CGTGGGCACG CTCGCGCTGA TGTTCCTCGC GCCGCTGGCG GCGGGTCTCG TGCAGATGGC GATCTCGCGG TCGCGCGAAT ATGAGGCGGA CCGGATCGGC GCCGAGATCT GCGGCCGTCC GCTCTGGCTC GCCTCGGCGC TGGGCAAGAT CGAGGGGCTC GCGCAGCGCA TCGACAATGT CCGGGCCGAG CGTAACCCCG CGACGGCGCA CATGTTCATC GTGAACCCGC TTCATGCGAT GGGCCACGAC CGGCTGTTCG CGACCCACCC GAACACCGCC AACCGGATCG CGGCGCTCCG CGCCATGGCC GAGGGCGCGC CGCAGGCCTC GCGCATTCCC CGCGTGGCCG CGCGCCGCGG TCCGTGGAGC TGA
|
Protein sequence | MGYVRTGILM AVMTALFLGV GALIGGQSGA IIALVIAAGM NLFTFWNSDR AVLSMHGAHE VDPRAAPDLY NMVRGLADRA GMPMPKLYLI ETDQPNAFAT GRNPENAAVA VTRGLLRALT PEEVAGVVAH ELAHIRNRDT LLMTVTATFA GAISMLANFA FFFGGSSNEE GERPMGLVGT LALMFLAPLA AGLVQMAISR SREYEADRIG AEICGRPLWL ASALGKIEGL AQRIDNVRAE RNPATAHMFI VNPLHAMGHD RLFATHPNTA NRIAALRAMA EGAPQASRIP RVAARRGPWS
|
| |