| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0540 |
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| Symbol | nifD |
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| ID | 3718049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | - |
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| Start bp | 2276885 |
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| End bp | 2278366 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640071749 |
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| Product | nitrogenase iron-molybdenum protein, alpha chain |
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| Protein accession | YP_353613 |
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| Protein GI | 77464109 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
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| TIGRFAM ID | [TIGR01282] nitrogenase molybdenum-iron protein alpha chain
[TIGR01862] nitrogenase component I, alpha chain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAAAG ATATCGCTGA CTCTGCCGAG ACCAACATGA AGCTGATCGA GGAGGTGCTG
GCCGCCTACC CCGACAAGGC CAGGAAGAAG CGCGCCAAGC ACCTGAATGT CGCAGCGCCC
GTCGCCGAGG CCGAACCCGG CCTCCAGTCG AAATGCGACA ATGTGAAATC GAACATCAAG
TCGGTCCCCG GCGTGATGAC CATCCGCGGC TGCGCCTATG CCGGCTCGAA GGGCGTGGTC
TGGGGCCCGG TCAAGGACAT GCTGCACATC AGCCACGGCC CGGTCGGCTG CGGCCACTAC
AGCTGGTCCC AGCGCCGCAA CTACTACACC GGCACGACGG GCGTGGATTC GTTCGTGACC
ATGCAGGTCA CCACCGACTT CCAGGAAAAC GACATCGTCT TCGGCGGTGA CAAGAAGCTG
GAAAAGACCA TCGACGAGCT GAACATGCTC TTCCCGCTGA ACAAGGGGAT CTCGATCCAG
TCGGAATGCC CGATCGGCCT GATCGGCGAC GACATCGAGG CGGTGTCGAA GAAGAAGGCC
AAGGACATCG GCAAGCGCGT CGTTCCGGTG CGCTGCGAGG GCTTCCGCGG CGTGTCGCAG
TCGCTCGGCC ACCATATCGC GAACGACATG ATCCGCGACT GGGTGCTGGA AGCGGGCGAG
GGCGCGCGCG CGGGCTACGA GCCCGGCCCC TATGACGTGA ACATCATCGG CGACTACAAC
ATCGGCGGCG ACGCCTGGTC GAGCCGGATC CTGCTGGAAG AGATCGGCCT CAACGTCATC
GCGCAATGGT CGGGCGACGC CACCATCGCC GAGATGGAGC GCGCTCCGGC GGCGAAGCTG
AACCTCATCC ACTGCTACCG TTCGATGAGC TACATCTGCC GGCACATGGA AGAGAACCAC
GGCGTGCCGT GGATGGAGTA CAACTTCTTC GGCCCCTCGC AGATCGCGGC CTCGCTGCGC
GCCATCGCCG CGAAGTTCGA CGACAGGATC CAGGCCAATG CCGAAGCGGT CATCGCGAAA
TACCAGCCGC TCGTCGATGC GGTGAACGCG AAATACAAGC CGCGCCTCGA AGGCAAGAAG
GTGATGCTCT ATGTGGGCGG CCTGCGTCCG CGCCACGTCG TCGACGCCTA CCATGACCTG
GGCATGGAGA TCGTGGGCAC CGGCTACGAA TTCGCCCACA ACGACGACTA CAAGCGCACC
GGCCATTACA TCAAGGAAGG CACGCTGATC TTCGACGACG TCTCGGGCTA CGAGCTGGAG
AAATTCGTCG AGGCGATCCG TCCCGATCTC GTGGGCTCGG GCATCAAGGA GAAATACAAC
ACGCAGAAGA TGGGCATCCC GTTCCGTCAG ATGCACTCCT GGGATTATTC CGGCCCCTAC
CACGGCTACG ACGGCTACGC GATCTTCGCG CGCGACATGG ATCTCGCGAT CAACAACCCC
GTCTGGGGCA TGTTCGATGC GCCCTGGAAG AAGACGGCCT GA
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| Protein sequence | MAKDIADSAE TNMKLIEEVL AAYPDKARKK RAKHLNVAAP VAEAEPGLQS KCDNVKSNIK
SVPGVMTIRG CAYAGSKGVV WGPVKDMLHI SHGPVGCGHY SWSQRRNYYT GTTGVDSFVT
MQVTTDFQEN DIVFGGDKKL EKTIDELNML FPLNKGISIQ SECPIGLIGD DIEAVSKKKA
KDIGKRVVPV RCEGFRGVSQ SLGHHIANDM IRDWVLEAGE GARAGYEPGP YDVNIIGDYN
IGGDAWSSRI LLEEIGLNVI AQWSGDATIA EMERAPAAKL NLIHCYRSMS YICRHMEENH
GVPWMEYNFF GPSQIAASLR AIAAKFDDRI QANAEAVIAK YQPLVDAVNA KYKPRLEGKK
VMLYVGGLRP RHVVDAYHDL GMEIVGTGYE FAHNDDYKRT GHYIKEGTLI FDDVSGYELE
KFVEAIRPDL VGSGIKEKYN TQKMGIPFRQ MHSWDYSGPY HGYDGYAIFA RDMDLAINNP
VWGMFDAPWK KTA
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