| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0538 |
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| Symbol | nifE |
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| ID | 3718047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | - |
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| Start bp | 2273554 |
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| End bp | 2275017 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640071747 |
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| Product | nifE, nitrogenase molybdenum-cofactor synthesis protein |
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| Protein accession | YP_353611 |
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| Protein GI | 77464107 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
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| TIGRFAM ID | [TIGR01283] nitrogenase molybdenum-iron cofactor biosynthesis protein NifE |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.510346 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGAAG CCTTGAAGCA GAAGATCCAG GACGCCTTTC ACGAGCCGGG CTGCGCCACG
AACACCGCCA AGTCCGAGGG CGAGCGCCGG AAGGGCTGCG CGAAACAGCT GACGCCCGGC
GCGGCGGCCG GGGGCTGCGC CTTCGACGGG GCGATGATCG CGCTGCAGCC CATCACCGAC
GTGGCCCATC TCGTCCATGC CCCGCTCGCC TGCTGGGGCA ACGGCTGGGA CAACCGCGGC
TCGGCCTCGT CGGGCTCCGA CCTCTACCGT CGCGGCTTCA CCACCGACCT CTCCGAGCTC
GACATCGTGA TGGGCCGCGG CGAGGCCAGG CTCTTCCGTG CCATCCGCGA AGTGATCGCG
CAGGAGAACC CGGCCGCAGT CTTCGTCTAT GCCACCTGCG TGACGGCGCT CATCGGCGAC
GACATCGGCG CCGTCTGCAA GGCCGCCGCC GAACGGTTCG GCCGCCCGGT GATCCCGATC
AACGTGCCGG GCTATGTGGG CTCGAAGAAC CTCGGCAACA AGCTGGGGGT GGACGCGCTG
GTCGAACATG TCGTGGGGAC GATGGAGCCC GCGACGGCGA CCGATTGCGA CATCAACATC
CTCGGCGACT TCAACCTGTC GGGCGAACTC TGGCAGGTGA AGCCGCTGCT CGACCGCCTC
GGCATCCGCA TCCTCGGCTC GGTCTCGGGG GATGCGCGCT ATGCGCAGGT GGCCATGATG
CACCGGGCGC GGGTGACGAT GCTCGTCTGC TCGCACGCCT TCCTGGGCAT CGCCCGCAAG
CTCGAGGACC GCTACGGCAT CCCGTGGTTC GAGGGCAGCT TCTACGGCAT CTCCGACACG
TCCGACGCGC TGCGGACCCT GTGCCGGATG CTGGTCGAGC GCGGCGCGCC CGCGGACCTC
GTGACCCGCT GCGAGGCGCT GATCGCCGAG GAGGAGGCCC GCACCTGGGC CGCGCTGGAA
CCGCTCCGCC CCGCCGTCGC CGGCCGGCGC GTGCTCCTTT ACACCGGCGG GCACAAGACC
TGGTCGGTGG TCTCGGCGCT GCAGGAACTC GGCATGGAGG TGGTCGGCAC CTCGATGCGC
AAGGCCACGC CCGGCGACCG CGCGCGCGTC ACCGAGATCA TGGGCACCGA GGCCCACATG
TACGAGAACA TGGCGCCGAA GGAGATGTAT CGGATGCTGC GGGACGCGCG GGCCGATGTG
CTTATGTCGG GGGGGCGGTC GCAGTTCGTG GCGCTGAAGG CCCGCGTGCC CTGGATCGAC
GTGAATCAGG AAAAGCACGA GCCCTACGCA GGCTACATGG GCATGGTCGA TCTCGTGCGC
GCCATCGACC GGTCGATCAA CAACCCGATG TGGGCCGAGC TGCGCGACCC CGCGCCTTGG
GACGTGCCGG CCGAAGAAGC CGCCGTGACG CCCTTCAGCC TCGCGGCCGT TCCCGGCTCG
AAAGCCGATT TCGAGGATTG CTGA
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| Protein sequence | MSEALKQKIQ DAFHEPGCAT NTAKSEGERR KGCAKQLTPG AAAGGCAFDG AMIALQPITD
VAHLVHAPLA CWGNGWDNRG SASSGSDLYR RGFTTDLSEL DIVMGRGEAR LFRAIREVIA
QENPAAVFVY ATCVTALIGD DIGAVCKAAA ERFGRPVIPI NVPGYVGSKN LGNKLGVDAL
VEHVVGTMEP ATATDCDINI LGDFNLSGEL WQVKPLLDRL GIRILGSVSG DARYAQVAMM
HRARVTMLVC SHAFLGIARK LEDRYGIPWF EGSFYGISDT SDALRTLCRM LVERGAPADL
VTRCEALIAE EEARTWAALE PLRPAVAGRR VLLYTGGHKT WSVVSALQEL GMEVVGTSMR
KATPGDRARV TEIMGTEAHM YENMAPKEMY RMLRDARADV LMSGGRSQFV ALKARVPWID
VNQEKHEPYA GYMGMVDLVR AIDRSINNPM WAELRDPAPW DVPAEEAAVT PFSLAAVPGS
KADFEDC
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