Gene RSP_0525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_0525 
Symbol 
ID3718438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007493 
Strand
Start bp2263490 
End bp2264149 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content70% 
IMG OID640071734 
Producthypothetical protein 
Protein accessionYP_353598 
Protein GI77464094 
COG category[R] General function prediction only 
COG ID[COG1272] Predicted membrane protein, hemolysin III homolog 
TIGRFAM ID[TIGR01065] channel protein, hemolysin III family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGACGC AGCGCACCCC CCGATCCGGC TACAGCCGCG CCGAGCGCCT CTCGGACGCG 
GCGGTTCATG TCTCGGGCAT CGCCGCGGCG CTCTGCGGCG TGCCCGTCCT CATCGCGCTG
ACCGTGCTCT GGCGCGGCGA CGGGATGGCC GTCGCGGGCG CCTCGATCTA CGGGGCCACG
CTCCTGCTCA TGATCCTCTG CTCGGCCGTC TACCACATGG TCCCGCACCC GGACTGGACG
GCGCTCCTGC GGCGCCTCGA CCATTCCGCC ATCTACTGCA AGATCGCGGG CACCTACTCG
GCCTTCACCC TGATCTCGGG ACAGGGGCTC ACGCTGCTGG CCGGGATCTG GGCCGCGGCC
CTCTGCGGCA CGGCGCTGAA GCTCCACTCG CCCGAGAAAT ACCGCTGGGG GGCGCTCGCG
CTCTATCTCG GGATGGGCTG GGCGGGGGTC GCCCTCGGCT GGCCGCTCTT CGCCTCGCTG
ACCGGCCCCG TTCTGGCGCT GATCGCGGCG GGCGGGCTGC TCTACACGGT GGGCGTCGTC
TTCTACCTGT GCGAACGCTT GCCCTTCCAC ACCACGATCT GGCATCTCTT CGTCCTGACG
GCGAGCGTGA TCTTCTACGC CGCGGTGATG ATCCATGTGG CCGGCACGGC GGCCGACTGA
 
Protein sequence
MLTQRTPRSG YSRAERLSDA AVHVSGIAAA LCGVPVLIAL TVLWRGDGMA VAGASIYGAT 
LLLMILCSAV YHMVPHPDWT ALLRRLDHSA IYCKIAGTYS AFTLISGQGL TLLAGIWAAA
LCGTALKLHS PEKYRWGALA LYLGMGWAGV ALGWPLFASL TGPVLALIAA GGLLYTVGVV
FYLCERLPFH TTIWHLFVLT ASVIFYAAVM IHVAGTAAD