Gene RSP_0499 details

Gene Information

• Locus tag: RSP_0499
• Symbol: hupD
• ID: 3718450
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodobacter sphaeroides 2.4.1
• Kingdom: Bacteria
• Replicon accession: NC_007493
• Strand: +
• Start bp: 2236151
• End bp: 2236771
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 640071707
• Product: HyaD peptidase
• Protein accession: YP_353571
• Protein GI: 77464067
• COG category: [C] Energy production and conversion
• COG ID: [COG0680] Ni,Fe-hydrogenase maturation factor
• TIGRFAM ID: [TIGR00072] hydrogenase maturation protease; [TIGR00140] hydrogenase expression/formation protein

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAGCAT CTCCACCCGC AAGGGTGCTC ATTCTCGGTA TCGGCAACGT GCTGTGGGCA 
GACGAGGGAT TCGGCCCCCG CTGCATCGAG ATCCTTGCCG AGAGCCACGC CTTCCCCTCG 
CAGGTCAAGC TGCTCGACGG CGGCACGCAG GGCCTCTACC TGCTGCCCTT CCTCGAAGAG 
GCCGACGCCC TCCTCGTGTT CGACGCGGTC GATTACGGTC TCGTGCCCGG CACGCTGATG 
ATCGCGCGCG ACGACGAAGT GCCCGCCTTC ATGGGCGCCA AGAAGATGAG CCTGCACCAG 
ACCGGCTTTC AGGACGTGCT GGCCACGGCC CAGCTTCTCG GGCGCTGCCC GGCGCGGCTG 
ACGCTGATCG GCTGCCAGCC CGAGGAGCTG GAGGATTACG GCGGCTCGCT GCGCCCGGTC 
GTGGCGGCCC AGATCGCACC GGCGATCGGC CTCGCGCTGG CCGAGCTCGC CCACTGGGGC 
GTGACCCCGC TGCCCGGCCG CAGCCCGGCC GAAGGGCTCG CCGATCCGTC GCTGCGCCGG 
GACGCCTACG AGACGGGCCG CCCCGGCCCC GACGAGGCCT GCCGCACGGG CGACGCCCGC 
TTCTTCCCGG AACCCTGCTG A 

 

Protein sequence

MPASPPARVL ILGIGNVLWA DEGFGPRCIE ILAESHAFPS QVKLLDGGTQ GLYLLPFLEE 
ADALLVFDAV DYGLVPGTLM IARDDEVPAF MGAKKMSLHQ TGFQDVLATA QLLGRCPARL 
TLIGCQPEEL EDYGGSLRPV VAAQIAPAIG LALAELAHWG VTPLPGRSPA EGLADPSLRR 
DAYETGRPGP DEACRTGDAR FFPEPC