Gene RSP_0498 details

Gene Information

• Locus tag: RSP_0498
• Symbol: hupC
• ID: 3718449
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodobacter sphaeroides 2.4.1
• Kingdom: Bacteria
• Replicon accession: NC_007493
• Strand: +
• Start bp: 2235213
• End bp: 2235860
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 640071706
• Product: Ni, Fe hydrogenase I cytochrome b subunit
• Protein accession: YP_353570
• Protein GI: 77464066
• COG category: [C] Energy production and conversion
• COG ID: [COG1969] Ni,Fe-hydrogenase I cytochrome b subunit
• TIGRFAM ID: [TIGR02125] Ni/Fe-hydrogenase, b-type cytochrome subunit

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCGGTGC GGCTCTGGCA CTGGCTGAAT GCCGCGATGA TCTTCATCCT GATCGGCTCG 
GGATACCTGA TCGCCCGGCC GCTTCCGACC ATGGAGATGG CCGAGGCGAC CGACCAGTTC 
GTCTTCGGCT ACATCCGCTT CGCCCATTTC GCGGCCGGAC AGGTGCTGAC CGTGGCCTTC 
GCGGCGCGGA TCCTGTGGGC CTTCTTCGGC AACGTCCATT CGCGGCAGAT GTTCAAGCTG 
CCGGTCTGGA ACCTGCGCTG GATCCGCGAG CTGATCTACG AGCTGAAATG GTATCTCTTC 
CTCGTGCCCG AGCCGCGGAA ATACGTCGGC CACAACCCTC TGGCCCATGC CGCGATGTTC 
TTCTTCATCA CGCTCGGCAT GAGTTTCATG ATCGTCACGG GCTTCGCGCT CTATGCCGAG 
GGCGCCGGTC AGGGCTCGGT CTACGACACC CTCTTCGGCT GGGTGCTGGG GCTGGTCGGC 
AACAGCCAGC GGCTGCACAC GCTGCACCAT CTGGGCATGT GGTCGATCGT GGTCTTCACC 
ATCATCCACA TCTATGCCGC CGTCCGCGAG GACATCATGT CCCGGCAGTC GATGATCTCG 
ACCATCGTCT CGGGCTGGCG GACCTTCAAG GACGACCGCG TGGAATAG 

 

Protein sequence

MPVRLWHWLN AAMIFILIGS GYLIARPLPT MEMAEATDQF VFGYIRFAHF AAGQVLTVAF 
AARILWAFFG NVHSRQMFKL PVWNLRWIRE LIYELKWYLF LVPEPRKYVG HNPLAHAAMF 
FFITLGMSFM IVTGFALYAE GAGQGSVYDT LFGWVLGLVG NSQRLHTLHH LGMWSIVVFT 
IIHIYAAVRE DIMSRQSMIS TIVSGWRTFK DDRVE