| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0487 |
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| Symbol | |
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| ID | 3718649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | - |
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| Start bp | 2220567 |
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| End bp | 2221544 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640071695 |
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| Product | TRAP dicarboxylate family transporter DctP subunit |
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| Protein accession | YP_353559 |
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| Protein GI | 77464055 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.281139 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA CAATGATCGC GACCCTGCTG GCGAGCGCCG CGCTCGCGGC ACCCGCCTTC
GCCGAGTGCG AGGTGACGCT GCGGTCTTCG GACACGCACC CGGACGGCTA TCCGACCGTC
GAGGGCGTCA AGTTCATGGC CGAGCGCGCC AAGGAACTGT CGAACGGGCG CATCTGCATC
GAGGTCTTCC CCTCGTCGCA GCTCGGCGAA GAGAAGGACA CGATCGAGCA GACCCAGTTC
GGCGTGATCG ACATGGTGCG CGCCTCGTTC GGCTCGTTCA ACGACATCGT GCCCGAGGCG
CAGCTCCTGT CGCTGCCCTA CCTCTTCCGC TCGGAAGAGC ATCTGCACAA TGTGATGGAC
GGCCCGATCG GCGACGAGCT CGCCAAGGCC TTCGAGGCCA AGGACCTGAT CGCGGTGGCC
TACTATGACG GTGGCTCGCG CAGCTTCTAC AACAGCCAGA AGCCGATCAC CAAGGTCGAG
GACCTCAAGG GCATGAAGTT CCGCGTCATG CAGTCGGACG TCTTCGTGGA CATGATGTCC
GCGCTCGGCG CCAATGCGAC GCCGATGCCC TACGGCGAGG TCTATTCCTC GATCCAGACC
GGCGTCATCG ACGGGGCCGA GAACAACTGG CCGTCCTACG ACAGCTCGGG CCATTTCGAG
GTGGCGAAAT ACTACACGCT CGACCAGCAT CTGATGGTGC CCGAGCTGGT GGCGATCTCG
AAGATCAAGT GGGACGCGCT CTCGCCCGAG GACCAGCAGG TGCTGCGTCA GGCGGCCGAA
GAGTCCGAGC CCGTGCAGCG CAAGCTCTGG GCCGAGCAGG AGAAGGCCTC GGAAGAGAAG
GTCGTGGCCT CCGGCGCCGA AGTCGTGCGC GAGATCGACA AGACCCCCTT CATCGAGGCG
ATGGCTCCGG TCTACGAGAA ATATGTGACC AAGCCGGAAT ATCAGGATCT CGTGAAGCGG
ATCCAGGAAA CCCAGTGA
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| Protein sequence | MKKTMIATLL ASAALAAPAF AECEVTLRSS DTHPDGYPTV EGVKFMAERA KELSNGRICI
EVFPSSQLGE EKDTIEQTQF GVIDMVRASF GSFNDIVPEA QLLSLPYLFR SEEHLHNVMD
GPIGDELAKA FEAKDLIAVA YYDGGSRSFY NSQKPITKVE DLKGMKFRVM QSDVFVDMMS
ALGANATPMP YGEVYSSIQT GVIDGAENNW PSYDSSGHFE VAKYYTLDQH LMVPELVAIS
KIKWDALSPE DQQVLRQAAE ESEPVQRKLW AEQEKASEEK VVASGAEVVR EIDKTPFIEA
MAPVYEKYVT KPEYQDLVKR IQETQ
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