Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_0484 |
Symbol | |
ID | 3718647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | - |
Start bp | 2218676 |
End bp | 2219956 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640071693 |
Product | TRAP dicarboxylate family transporter DctM subunit |
Protein accession | YP_353557 |
Protein GI | 77464053 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.424428 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAGCTCT TCATCCTGTT CGGAAGCTTC GTCTTCCTTC TCCTGATCGG CACGCCTGTC GCCTTCTGCC TCGGCGTGTC GAGTTTCCTC ACCGTGCTCT ATCTGGGCCT GCCGCCGGTC GTGGTGTTCC AGCGCCTCAA CTCGGGCGTC TCGGTCTATG CGCTGATGGC CATCCCCTTC TTCATCTATT CGGGCGATCT GATGGTGCGG GGCGACATCG CCCGACGGCT CGTGGCGCTG GCAGGCGCGC TGGTCGGCCA CCTCCGGGGC GGGCTCGGAC AGGTGAACGT CGTGGCCTCG GTCATGTTCG GCGGCGTCTC GGGCTCGGCC GCGGCGGATG CCTCGGCGGT GGGCGGCCTC ATGGTGCCGC AGATGAAGGC CCGCGGCTAC GGCGTCGACT ATGCCGTGAA CCTGACCGTC GTGGGCTCGA TCATCGCGCT GATGATCCCG CCCTCGCACA ACATGATCAT CTATTCCATC GCCGCGGGCG GCCGGATCTC GATCGCGGAC CTCTTCACGG CAGGCATCAT CCCGGGCCTC CTGCTCGCGC TGGGGCTGAT GGTGGCGGCC TATTTCGTGG CCCGCCGCCG CGGCTATCCG ACCGAGCGCT TTCCGGGGCT GCGCGCGCTC GGTGCCATCT TCGTGAGCGC CGTGCCGGGG CTCATCCTCG TCGCGCTGAT CTTCGGCGGC GTGCGCTCGG GCATCTTCAC CGCCTCGGAA AGCGCCAACA TCGCCGTGGT CTATGCGCTG CTCGTCACCA TCCTGATCTA CCGCACTCTC ACGTGGTCCG AGTTCGTCCA TGCCACCATC GGCGCGGTGC GCACGACGGC CATGGTGCTG CTCGTGATCG GCTGCGCGGC CTCGTTCGGC TGGCTTCTGG CCTATCTCAA GGTGCCGACG GCGCTGGTGG CCTTCATGCA GGGGCTGTCG GACAATCCGC TGGTGATCCT GCTGCTCATC AACGTGGCGC TCCTGGTGCT CGGCACCTTC ATGGACATGT CGCCGCTGAT CGTCATCACG ACGCCGATCT TCCTGCCGGT GGCGCAGGCC TTCGGGGTGG ATCCGGTGCA TTTCGGCGTC ATCCTGATCC TGAACCTCGG GATCGGCCTC TGCACGCCGC CCGTCGGGGC CGTGCTCTTC GTGGGCTGCG CCGTGGGGCG GATCTCGATC TGGACGGCGA TGCGCACCAT CTGGCCCTTC TACGGGGCGG CCCTCGCCGT CCTGCTGCTC GTGACCTACA TCCCGGCGCT GTCGCTCTGG CTGCCGGCCC AATTCCGCTG A
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Protein sequence | MELFILFGSF VFLLLIGTPV AFCLGVSSFL TVLYLGLPPV VVFQRLNSGV SVYALMAIPF FIYSGDLMVR GDIARRLVAL AGALVGHLRG GLGQVNVVAS VMFGGVSGSA AADASAVGGL MVPQMKARGY GVDYAVNLTV VGSIIALMIP PSHNMIIYSI AAGGRISIAD LFTAGIIPGL LLALGLMVAA YFVARRRGYP TERFPGLRAL GAIFVSAVPG LILVALIFGG VRSGIFTASE SANIAVVYAL LVTILIYRTL TWSEFVHATI GAVRTTAMVL LVIGCAASFG WLLAYLKVPT ALVAFMQGLS DNPLVILLLI NVALLVLGTF MDMSPLIVIT TPIFLPVAQA FGVDPVHFGV ILILNLGIGL CTPPVGAVLF VGCAVGRISI WTAMRTIWPF YGAALAVLLL VTYIPALSLW LPAQFR
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