| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0467 |
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| Symbol | ubiD |
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| ID | 3718746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | + |
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| Start bp | 2201698 |
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| End bp | 2203191 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640071676 |
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| Product | 3-octaprenyl-4hydroxybenzoate decarboxylase |
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| Protein accession | YP_353540 |
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| Protein GI | 77464036 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.719328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAGCC TGCCCATCTT CCCGGATCTC CGGGCCTTTC TCGACTGGTG CGCCCGAAAG
GGCGACCTCT CCCGGATCGC CGAGCCGGTC TCGCTGCGGC ATGAAACCAC AGCCGTGGCC
TCGAAGATCC TGCGCGGCGG CGGCCCCGTG CTGCGGTTCG AGAGCCTGCG CGACACCTCG
GCCACCATGC CGCTCGTGGC CAACCTCTTC GGCACGCGCG AGCGGGTGGC GGCGGGTCTC
GGCCTCGGGC TCGAGCAGAT CCCCGAGCTC GGCGCCTTCC TCGCCGCCCT GCGAGCCCCT
GCTCCGGTGG CGGGGATGCG CGACGCGCTC TCGCGCTGGC CGCAGCTTCA GGCCGCGCTG
AACACGCGCG CGAAGATCGT GCGGTCGGCC GAGGCGCAGG AGGTGGTCCA CGAGGGTGCC
GCGGTCGATC TCGGCATGAT CCCGGTGCCC ACCTGCTGGC CGGGCGATGC GGGCCCTCTG
GTGACATGGC CCGTCGTGCT GACGCGGCCG CACGGCACCT CCGCCGAAGA GACGCTGCAC
TACAATGCCG GCGTCTACCG CGCGCAGGTG ATCGGGCGCG ACCGGCTCAT CATGCGCTGG
CTCGCCCATC GCGGCGGCGC CGGGCACTGC CGCAGCTGGA TGCGTGCGGG CGAGCCGATG
CCGGTGGCGC TGGCGCTCGG CTGCGATCCG GCGCTCCTTC TGGCCGCGGC GCTGCCCCTC
CCTGAGCAGG TGTCCGAGCT GACCTTCTCG GGCGTGCTCC GGGGCGCGCG GACGCCGCTG
GTGGCGGGCC GCACCGTGCC GCTGATGGTG CCCGCCACCG CCGAGATCGT GGTCGAGGGC
TGGGTCCACC CCGGCGACAT GGCGCCCGAG GGCCCCTTCG GCGACCACAC CGGCTATTAC
AATTCGGTCG AGGATTTTCC CGTGCTGCGG GTCTCGGCCA TCACCCACCG CAAGGATCCG
CTTTACCTCA CCACCCACAC GGGCCGCCCG CCGGACGAGC CCTCGGTCAT CGGCGAGGTC
TTCAACGATC TCGCCATGCC GGTCTTCCGC CAGCAGATCC CCGAGGTGAA GGATCTCTAC
CTGCCCCCCG CCGCCTGCTC CTACCGCATC GCCATCGTCT CGATCGACAA GCGCTATCCC
GGTCAGGCGC GGCGGGTGAT GATGGCGCTC TGGGGGATGC TGGCGCAATT CTCCTACACC
AAGATGGTGA TCGTGGTGGA TGAGGACATC AACCCGCGCG ACTGGGACGA TGTGGCCTGG
GCGATGGCGA CCCGGATGGA CCCGTCGCGC GACGTGGTGC TGCTCGAGAA GACGCCGATG
GATTACCTCG ACTTCGCCTC GCCCGAGCCC GGCCTTGCCG GCAAGATCGG GATCGACGCC
ACCAACAAGA TCGGCCCCGA GACCCATCGC GAATGGGGCG AGGTCATGAC GCAGTCGCCC
GAGGCCGAAG CCTTCGCCGA CCGGCTGATC GCGAAGCTGA GGATCGGAGC ATGA
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| Protein sequence | MRSLPIFPDL RAFLDWCARK GDLSRIAEPV SLRHETTAVA SKILRGGGPV LRFESLRDTS
ATMPLVANLF GTRERVAAGL GLGLEQIPEL GAFLAALRAP APVAGMRDAL SRWPQLQAAL
NTRAKIVRSA EAQEVVHEGA AVDLGMIPVP TCWPGDAGPL VTWPVVLTRP HGTSAEETLH
YNAGVYRAQV IGRDRLIMRW LAHRGGAGHC RSWMRAGEPM PVALALGCDP ALLLAAALPL
PEQVSELTFS GVLRGARTPL VAGRTVPLMV PATAEIVVEG WVHPGDMAPE GPFGDHTGYY
NSVEDFPVLR VSAITHRKDP LYLTTHTGRP PDEPSVIGEV FNDLAMPVFR QQIPEVKDLY
LPPAACSYRI AIVSIDKRYP GQARRVMMAL WGMLAQFSYT KMVIVVDEDI NPRDWDDVAW
AMATRMDPSR DVVLLEKTPM DYLDFASPEP GLAGKIGIDA TNKIGPETHR EWGEVMTQSP
EAEAFADRLI AKLRIGA
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