| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0410 |
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| Symbol | |
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| ID | 3718880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | - |
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| Start bp | 2143501 |
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| End bp | 2144508 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640071621 |
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| Product | sensor diguanylate cyclase (GGDEF) |
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| Protein accession | YP_353485 |
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| Protein GI | 77463981 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.294866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCAATC TTTCAAAGCC CGTCGGCATC GGGGCAGGGG GGCTCGACCT CCTCATGCCC
ATGCATCTGC GTCTCGATCC GCTGGGCGAG ATCGCGGGCT GCGGCCCGAC CCTGCGCAAG
CTCTTCGCCG AGTCGCCGGT GCGCCGGCCC TTCTTCGACC TCTTCAAGGT GCGCAGACCC
ACGGGCATCG AGACGCCGGC GGCGCTCGCC GCGCGCACCG GCGTGCGCCT CCATCTCACC
ACGCTCGACG GCGGCGTCAG CCTGCGCGGG GTGGCCACGC CGAAGCACGA GGGGCGGGGT
CTTCTGCTGA ACCTGTCCTT CGGGATCTCT GTGATCGAGG CCGTGCGCCG CCACGGCCTG
ACCGACGGAG ACTTCGCGCC GACCGACCTC GCGGTCGAGC TGCTCTATCT GGTCGAGGCC
AAGACCGCCG TCGCCGAGGA ACTGCGCCGC CTCAACGGCC GGCTCGAGAG GGCCCGCCGG
CTGGCCGAGG AGGAGGCGCT GACGGACGAG CTTACGGGGC TCCGGAACCG TCGGGCCATC
GATCAGGCCC TCGAGGCCGT GATCGCCACG CGCCGGCCCT TCGGGCTGAT GCATCTCGAT
CTCGATTTCT TCAAGGAGGT GAACGACAGT TTCGGCCATG CCGCGGGCGA CGAGGTGCTG
CGCGCGGTGG CGCAGGTCCT GTCGCGCGAG ACCCGGACGG GAGATACGGT GGCCCGGATC
GGGGGCGACG AATTCATGAT GCTCTTCCCC GGCCTCTCCG ATCCCGCGCC GATGAAGCGG
CTGGCCGCGC GGGTCATTGC CGATGTGGCC CGGCCCATCC CCTTCGGCGG CGGTGTCTGC
CGCGTCTCGG CCAGCATCGG CATGACGCTC TCGGTGCGGT ATGACCGGCC CGACCTCGCG
CGGATGCTCG CCGATGCGGA TGAGGCGCTC TACGCGGCCA AGCGCGCCGG CCGGGGGACC
GCCGTGCTGA GCGAGGGGAT GCGACCGGAG CGTCGGCGCG ATCCCTAG
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| Protein sequence | MGNLSKPVGI GAGGLDLLMP MHLRLDPLGE IAGCGPTLRK LFAESPVRRP FFDLFKVRRP
TGIETPAALA ARTGVRLHLT TLDGGVSLRG VATPKHEGRG LLLNLSFGIS VIEAVRRHGL
TDGDFAPTDL AVELLYLVEA KTAVAEELRR LNGRLERARR LAEEEALTDE LTGLRNRRAI
DQALEAVIAT RRPFGLMHLD LDFFKEVNDS FGHAAGDEVL RAVAQVLSRE TRTGDTVARI
GGDEFMMLFP GLSDPAPMKR LAARVIADVA RPIPFGGGVC RVSASIGMTL SVRYDRPDLA
RMLADADEAL YAAKRAGRGT AVLSEGMRPE RRRDP
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