| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0406 |
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| Symbol | |
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| ID | 3718876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | - |
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| Start bp | 2139213 |
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| End bp | 2140256 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640071617 |
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| Product | periplasmic sensor diguanylate cyclase (GGDEF) |
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| Protein accession | YP_353481 |
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| Protein GI | 77463977 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGGCA TGATCGCCCT GATCTACGGC AGCGTGCAGA GGCTGGGGCT GTCGCGCCGC
CTGCGGCATG TGCTGCTGGG CCTCGCCTTC GGCTTCGGGG CGAGCGTGCA GATGATGCAA
TCGATCGCCG TGGCCCCCGG GGTCATCGTG GACAGCCGCG CGCTCTTCAT CGGCTTCGCA
GGTGCCTTCC TCGGGCCTCT CGGTGCGACG GTCGCCCTCA TGGTCAGCCT CCTCTTGCGG
ATCTCGCTCG TCTCGACCGC GATGCCCGCG CTGGCCGCCG GCTCGATGGC CGCATCGGCC
CTGATGGGAT CGCTCTGGCC GGTGCTGCGC CGCAGGCTCG GGCTCGGCCA TTTCACGGGG
CTCGTCTTGC TCGCGGTGAT GATCTCGCTG CCCCTCGTGC TGCTGGCCTG GCTGCCCGTC
GGGCGCACCG ACTCGCTCGA GGTGCTCGCC GCCATCCTCG TCCTGCTCAA TCTGACAGGG
GCGCTGGTGT TCGGCACCTT CCTCCAGCGC GAGAGGGCGG CCGCGCAGCG CGAGCGGACG
CTGCTCACCG AGACCCAGAC CGATCCTCTG ACCGGCGTGC TGAACCGGCG CAGCTTCGAG
CGCCGGTTCG CGGAGGCCGA CAGCCTCGCG CGGTCGCGGG GCACCGCGCT CATGATCGTG
GACATCGACC ATTTCAAGCG GGTGAACGAC ATCCACGGGC ATGAGGCGGG CGATCATGTG
TTGCGCGCGA TGGCCGAGCG GTTGCGCCGG GCCGTGCGGC CCGGGGACAG CGTGATCCGC
CTCGGCGGCG AGGAATTCGC GGTGCTCATG CCGGATGTCG ATGCGCCCGA GGCCGGCCGC
GCGGCCGAAC GGCTGCAGCG GATGCTGACC ATGAGTTGCC GGATCGGAGA TCTGACGCGG
GTGGATGTCA CGGTGAGCAT CGGCGCCACG CATCTGCCGC CGGGCCGCGT CGACCTCGGC
GAGGCGAGCC GCACTGCGGA CGGGGCGCTC TACCGTGCCA AGCGCGAGGG CCGCGCCCGG
TCGATCTTCG AAGCCTGCGC CTGA
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| Protein sequence | MMGMIALIYG SVQRLGLSRR LRHVLLGLAF GFGASVQMMQ SIAVAPGVIV DSRALFIGFA
GAFLGPLGAT VALMVSLLLR ISLVSTAMPA LAAGSMAASA LMGSLWPVLR RRLGLGHFTG
LVLLAVMISL PLVLLAWLPV GRTDSLEVLA AILVLLNLTG ALVFGTFLQR ERAAAQRERT
LLTETQTDPL TGVLNRRSFE RRFAEADSLA RSRGTALMIV DIDHFKRVND IHGHEAGDHV
LRAMAERLRR AVRPGDSVIR LGGEEFAVLM PDVDAPEAGR AAERLQRMLT MSCRIGDLTR
VDVTVSIGAT HLPPGRVDLG EASRTADGAL YRAKREGRAR SIFEACA
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