| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0356 |
|---|
| Symbol | |
|---|
| ID | 3718979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | - |
|---|
| Start bp | 2086429 |
|---|
| End bp | 2087451 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640071566 |
|---|
| Product | HflC protein |
|---|
| Protein accession | YP_353431 |
|---|
| Protein GI | 77463927 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | [TIGR01932] HflC protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.534146 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGCA GCTCTCTCAT CCTGCCCATC CTCGCCATTC TGGTTGCCGT GGGCTTCTCG
TCGATCTTCA TCGTGGACGA GCGCGAGAAG GCGCTGGTGC TGCAGTTCGG TCAGGTGAAG
GCGGTCAAGG AAGAACCGGG CATCGGCTTC AAGATCCCCC TCATCCAGGA GGTCGTGCGC
TACGACGGGC GCATCCTTGG CCTGCCCACG CAGCCGCTCG AGGTGACCCC GCTCGACGAC
CGGCGCCTCG TGGTCGATGC CTTCGCCCGC TGGCGCATCG TGGATCTCGT CGAATTCCGC
GAGGCCGTGG GTGCGGGCGG CATCGAGGCG GCGCAGACCC GGCTCCAGCG CATCATGAGC
CCGGCCATTC GCGAAGTGCT GGGTGGCGTG CCCTCGATCC GCGTCCTCTC CGAGGACCGG
ACGGTGCTCA TGAACCAGAT CCGCGATCTG GCCCGCCGTC AGGCGCTGGC CTTGGGTGTG
GACGTGATCG ACGTGCGTCT CACCCGCACC GACCTGCCCG AGCAGAACCT GTCGGCCACC
TACGGCCGGA TGCGGGCCGA GCGCGAGCGT GAGGCGGCCG ACGAGATCGC CCGCGGCAAC
GAGGCGGCGC AGCGCGTGCG CGCGGCCGCG GACCGGACCG TGGTCGAGGT GACGTCCGAG
GCGCGCCGTC AGGCCGAGGT GATCCGCGGC GAGGCCGACG CTCAGCGGAA CTCGGTCTAT
GCGGAGGCCT TCGGCCGCGA TCCCGAGTTC TTCGCCTTCA CCCGCTCGCT CACCTCCTAC
GAGCGCGCGC TGCAGGGCGG CGGCTCCTCC ATCGTCATGC AGCCCGACAG CGAGTTCTTC
CAGTATCTGC GCAGCGACCG CGCGCCGGAA GGCACGCCGC GCCCCGCAGC GCCGGCGGCG
GCGTCCCCCG AAACGGGTGA CGCGACCGCT CCTGCGGGCG AGCAGACGGG CCAGGCCGAA
GAGACACCGG CGGCTCCGCC CGCCGGTCAG GATGCCGCCA CGCCCGCACC GGCCGTCCAG
TGA
|
|---|
| Protein sequence | MNRSSLILPI LAILVAVGFS SIFIVDEREK ALVLQFGQVK AVKEEPGIGF KIPLIQEVVR
YDGRILGLPT QPLEVTPLDD RRLVVDAFAR WRIVDLVEFR EAVGAGGIEA AQTRLQRIMS
PAIREVLGGV PSIRVLSEDR TVLMNQIRDL ARRQALALGV DVIDVRLTRT DLPEQNLSAT
YGRMRAERER EAADEIARGN EAAQRVRAAA DRTVVEVTSE ARRQAEVIRG EADAQRNSVY
AEAFGRDPEF FAFTRSLTSY ERALQGGGSS IVMQPDSEFF QYLRSDRAPE GTPRPAAPAA
ASPETGDATA PAGEQTGQAE ETPAAPPAGQ DAATPAPAVQ
|
|---|
| |