Gene RSP_0342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_0342 
Symbol 
ID3719023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007493 
Strand
Start bp2072568 
End bp2073515 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content70% 
IMG OID640071553 
Productputative ABC sugar transporter, inner membrane subunit 
Protein accessionYP_353418 
Protein GI77463914 
COG category[R] General function prediction only 
COG ID[COG1079] Uncharacterized ABC-type transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCGC TGTTCGAGAT CCTTCTCTCC GCGACCTTCT GGGCCGCGGC GGTCCGCATC 
GCCTCGCCGC TGATCTTCGC CACCATGGGC GAGCTCATCT GCGAGCGGGC GGGCGTGCTG
AACCTCGGGA TCGAGGGGAT CATGGCGATC GGGGCCTTCT CGGGCTGGAT CGCGGTCTGG
GCGGGGGCCG GGCTCTGGGA GGGCGTGGCC ATCGCCATGG CGACAGGGAT GCTCTTCGGC
CTCCTCCATG CCGTGCTCGT GGTGCCCTTC GGGCTCTCGC AGCATGTGGT GGGGCTGGGG
GTCACGCTGC TTGCCACCTC GACCAGCTAC TTCGCCTACC GGCTGATCCT GCCCGAGGTC
ACGAGCCCGC CCAAAATCGA GCCCTTCGCC GTCTGGGAGG TGCCGGGCCT GTCGCAGATC
CCGCTTCTGG GGCCCGCGCT CTTTGCCCAG ACCCCGCTCA CCTATGCGGC CTTCGCGGTG
GCGGCGCTGA CGGCGCTTGT CCTCTGGCGC ACGCCGCTCG GCCTTGCGCT GCGGGCGGCC
GGCGAGAATC CGGCGGCGGT CGATGCGCAG GGCCTCTCGG TCACGGGGCT CCGCATCGGC
GCGGTCATGG TGGGGTCGGG GCTGATGGCT GTGGGTGGCG CCTTCCTCAC CCTTTCGGCC
TTCTCGAGCT TCTTCTTCGA GATGGTGAAC GGCCGCGGCT GGATCTGTAT CGCGCTCGTG
GTCTTCGGCG CGTGGCGGCC CGGCAAGGCC GTGCTCGGCG CGCTTCTCTT TGCCGCCTTC
GACGCGCTGC AGGTGCGGCT TCAGCAGACG CCGGTGGGGC AGGTCGTGCC CTATCAGCTC
TTCCTGATGG CCCCCTATGC GCTGTCCATC GCGGCCCTCG TCCTCATGTC GCGCCGGGCC
GAAGTGCCGG CGGCTCTGAT GCAGCCGTTC AACAGGGGAG AACGCTGA
 
Protein sequence
MSALFEILLS ATFWAAAVRI ASPLIFATMG ELICERAGVL NLGIEGIMAI GAFSGWIAVW 
AGAGLWEGVA IAMATGMLFG LLHAVLVVPF GLSQHVVGLG VTLLATSTSY FAYRLILPEV
TSPPKIEPFA VWEVPGLSQI PLLGPALFAQ TPLTYAAFAV AALTALVLWR TPLGLALRAA
GENPAAVDAQ GLSVTGLRIG AVMVGSGLMA VGGAFLTLSA FSSFFFEMVN GRGWICIALV
VFGAWRPGKA VLGALLFAAF DALQVRLQQT PVGQVVPYQL FLMAPYALSI AALVLMSRRA
EVPAALMQPF NRGER