| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0341 |
|---|
| Symbol | |
|---|
| ID | 3719022 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | - |
|---|
| Start bp | 2071291 |
|---|
| End bp | 2072568 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640071552 |
|---|
| Product | cytosine deaminase |
|---|
| Protein accession | YP_353417 |
|---|
| Protein GI | 77463913 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGATC TGATCGTCAA GGGGGGCACG CTGCCCGATG GGCGCGTGGC CGATGTGGGC
ATCCGGGGCG ACCGGATCGC GGCCATCGGG GCGCTCGGGA CCGACGCGGC GCGGCTGATC
GAGGCCACGG GCGATCTGGT GAGCCCGGCC TTCGTCGATC CGCATTTCCA CATGGATGCG
ACGCTCTCCT ACGGGCTGCC GCGCGTGAAT GCGAGCGGGA CGCTGCTCGA GGGTATCCGG
CTCTGGGGCG AGCTGAAGGA GATCGTGACC GTCGAGGCCA TGGTCGAGCG GGCGCTGGCC
TATTGCGACT GGGCGGCGAG CATGGGCCTT CTGGCGGTGC GGACCCATGT CGATGTCTGC
GACGACCGGC TGCTCGGTGT CGAGGCGATG CTCGCCGTGC GCGAAAAGGT CAAGGACTGG
ATGGATCTCC AGCTCGTGGC CTTCCCGCAG GACGGGCTCT ACCGCGACCC GACCGCGCGG
GCGAACCTCT TGCGTGCGCT CGACATGGGC GTGGATGTGG TGGGGGGCAT CCCGCATTTC
GAGCGGACCA TGGCGGACGG CGCGGCCTCG GTGCGCGACC TCTGCGAGAT CGCGGCCGAC
CGCGGGCTGC CGATCGATTT CCACTGCGAC GAGACCGACG ATCCGCTGAG CCGCCATATC
GAGACCTATG CCGCCGAGGT GCTGCGCACG GGGCTTCAGG GCCGTGCCGC GGCGGGGCAC
CTGACCTCGA TGCATTCGAT GGACAATTAC TATGTCTCGA AGCTCCTGCC GCTGATCGCC
GAGGCCGGGA TCGCCGCCAT CCCGAACCCG CTCATCAACA TCGTCCTCCA GGGCCGCCAC
GACAGCTTCC CCAAGCGGCG CGGGCTCACG CGGGTCAAGG AGATGCAGGC CATGGGCATC
ACGGTGGGCT GGGGGCAGGA TTGCGTGCTC GACCCGTGGT ATTCGCTGGG CACCGCCGAC
ATGCTCGACG TGGCCTTCAT GGGGCTGCAT GTGGCGCAGA TGACCCATCC CGACGAGATG
CGGCGCTGCT TCGACATGGT GACGGTCGAG AATGCCAGGA TCATGGGCCT CGACTACGGG
CTGCGGGAGG GGGCGGTGGC CTCGCTCGTG GTGCTCGACG CGGGCAACCC TGTCGAGGCG
CTGCGGCTCC GGCCCGACCG GCTCTGCGTG ATCGCGAAGG GGCAGGTGGT GTCGGAGAAG
GCGCGCAACG ACGCGCGCCT GAGCCTGCCG GGGAGGCCGG AGACCGTGCG CCGTCGCCAC
CTCCTGCCCC AGCGCTGA
|
|---|
| Protein sequence | MFDLIVKGGT LPDGRVADVG IRGDRIAAIG ALGTDAARLI EATGDLVSPA FVDPHFHMDA
TLSYGLPRVN ASGTLLEGIR LWGELKEIVT VEAMVERALA YCDWAASMGL LAVRTHVDVC
DDRLLGVEAM LAVREKVKDW MDLQLVAFPQ DGLYRDPTAR ANLLRALDMG VDVVGGIPHF
ERTMADGAAS VRDLCEIAAD RGLPIDFHCD ETDDPLSRHI ETYAAEVLRT GLQGRAAAGH
LTSMHSMDNY YVSKLLPLIA EAGIAAIPNP LINIVLQGRH DSFPKRRGLT RVKEMQAMGI
TVGWGQDCVL DPWYSLGTAD MLDVAFMGLH VAQMTHPDEM RRCFDMVTVE NARIMGLDYG
LREGAVASLV VLDAGNPVEA LRLRPDRLCV IAKGQVVSEK ARNDARLSLP GRPETVRRRH
LLPQR
|
|---|
| |