| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0335 |
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| Symbol | |
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| ID | 3719017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | + |
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| Start bp | 2065080 |
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| End bp | 2067449 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640071547 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_353412 |
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| Protein GI | 77463908 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGGCA AGGGACAGGG TGGATCTTGG GTGCCGGGGG TCGTTTCCGC GACCGACCGC
GGCAATTTCC ATGCAAGCCC CACCACCGCC ACGGTGCTTG ACATCATCGG CCGCATCCTG
CGCGCCCCGC TCTCTGCCAC CGACACCGAG ATCGAGACCG CCCTCGCGCA GGTGGCGGAC
GCCTGCAGCG CGGATGTCGC GCAGGTCTGC CGTGCGGGGA CCACGGGCCC TCTCGAGCCG
ATCCACAGCT GGGTGCGTGA CGGCCATATC GTCTTGAACA TCCAAGACTT GTGCAAATTC
TGCCCGGGGT CGGACCAGAC CGGGCCCGTC ATGCTGCGCG ACCTGAAGGA CCTTCCCGAG
GGGCCGGCCC GCGATCGGCT CGCGGGGATG GAGTTGCGGT CGCTCGTCGC GGTGCCGATG
CTACGGCACG GGGTGCTGGC GGGCCGGGTG CTTCTGGGCT GGCAGACGGC GAGCAGCGAC
CTGCGCCCCG AGGATCTCGC CGCGCTGCAG TCCCTCGCCG AGGCCATGCA TGCGGCCGCG
GAGCGACGCG AAAGCGAGCG GCTCACGACG GAGGCGGCAG CGGCGCTGCA GGAGGACCGG
CTTCTTCTCG AATCGATCCT GCGGACCAGC ACCTCGGCCA TCCTCGCCTT CGATGCCGAT
GCCCGCATCG TCTTCGCCAA CGATGAGGCG GCGGCCCTCC TCGGAACGGA CGCGAACCGT
CTGCCGGGAT GCACCCTCGA GGGCGTGGGC TGCCGCCTTC TGTCGCGCGA GGGCGAGCCC
CTCCCGCCCG AGGCCCTGCC GGTCGCGCGC GCCATTGCTG AGGGGCAGAC GCTCCGCGAC
CTGCACCATG TGCTGATGGC CGCCGACGGC CGACAGAGGA TCCTGTCGAT CAACGCGGCC
CCCGTGGCGG CCGGCGCGGC GACAGCGGTG CGCGTCGTCG CCACCATCGA CGACGTGACC
GGTCAGGTCT CGGCCGACAG CGCGCTGCGC ACGGCGCTCG CCGAAGCGCA TCAGCTCGCC
TTCTTCGACC CTCTGACGGG GCTTTACAAC CGCCGGGGCA TCGTCGAGGT GCTGCGCGAC
TGCCTCCAGA CCTGCGCCCG CGAGAAGGCC TTCCTCTCGC TTCTCTATAT CGATCTGGAC
GGGATGCGGC AGGTGAACGG CACCCGCGGG CACTGGCTGG GCGACCGGGT CCTGCAGGCG
CTGGGCGCGC GGCTGGACAA CCTGCGGCAG GACGGCGGCG ACCTCGGCCG GATCTCGGCC
GACGAATTCG TGCTGACCTG CGGCGAGACC CATCCCGACG CCGCCGGCGC GGTCGCCGCC
GCCGAGGCCG AGGCCCAGCG CATCCTCGAG TCGCTGCGGG AGCCGTTCGT GGTGGATGGC
CTCACGCTCG AGGTCACCGC CTCGATCGGC CTTGCCGCCA TTTCGGCCGA GGATTCGGTC
GAGGGGCTGC TGAAGGGCGT CGATCTGGCC GTCATGGCCG CCAAGGCCGC GGGCGGCGAC
AGGGCCTGTG CCTACCGGGC CGACATGGAG CAGGACATGG TGGGTCGCGT GGCCCTCGCG
CAGGAGTTGC GCGAGGCGAT CCGCCGCGAC GAGTTCCGCA TCTACTTCGA ACCGATGGTC
AGCCTCGGCG AGACCGGGCT CGAGATCGTG GGTCAGGAGG CGCTGATCCG CTGGGAGCAT
CCGCAGCGCG GGCTTCTGGC GCCCATCGCC TTCATCCCCT TCGCCGAGGA GACCGGCTTC
ATCCGCGACA TCGACCGCTG GGTGCTGCGC GCGGCGGCAC AGGAGCTCGC CCGCTGGGCC
GAGGATCCCG CGCGCCGCCA TCTCGGGGTC TCGATCAACA TCAGCTCGGC GCAGTTCCTG
TCCGAGGAGT TCGGCCAGAT GGTGCGCGAG GTGCTGGACG AGACCGGCGT CGATCCCACC
CGGATCGAGC TGGAGGTCAC CGAGGGCACG CTCCTGTCCA ATCTCGGCCT CGCGCGGACC
ACGATGATGG ACCTGCGCTC GCTCGGCATC TCCATCGCGC TGGACGATTT CGGCACCGGC
TTCTCCTCGC TCAGCTATCT GCGGGACCTG CCCGTGGACG TGTTGAAGAT CGACCGCAGC
TTCTTGGGCG GCCTGTCGGA CTCGAAGGCG AACCGGACCA TCCTCGAAGG GATCATCGGA
CTTGCCTCGG GGCTCGGCGT GGCGCTGGTG GCCGAGGGGG TGGAGACGCC GGCGCAGTTC
GCCTGGCTGC GGGCCAAGGG ATGCCGGACC TTCCAGGGCT ACCTCTTCGG CCGCCCGGTC
GATGAGGCGC AGACGCAGCT CGCGCCCGAG GTGTCCGCGC TCGGCGGCCA CGGAGGCGAC
CGTGCGGTTT CGGGCCAGAT CAAGGGCTGA
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| Protein sequence | MTGKGQGGSW VPGVVSATDR GNFHASPTTA TVLDIIGRIL RAPLSATDTE IETALAQVAD
ACSADVAQVC RAGTTGPLEP IHSWVRDGHI VLNIQDLCKF CPGSDQTGPV MLRDLKDLPE
GPARDRLAGM ELRSLVAVPM LRHGVLAGRV LLGWQTASSD LRPEDLAALQ SLAEAMHAAA
ERRESERLTT EAAAALQEDR LLLESILRTS TSAILAFDAD ARIVFANDEA AALLGTDANR
LPGCTLEGVG CRLLSREGEP LPPEALPVAR AIAEGQTLRD LHHVLMAADG RQRILSINAA
PVAAGAATAV RVVATIDDVT GQVSADSALR TALAEAHQLA FFDPLTGLYN RRGIVEVLRD
CLQTCAREKA FLSLLYIDLD GMRQVNGTRG HWLGDRVLQA LGARLDNLRQ DGGDLGRISA
DEFVLTCGET HPDAAGAVAA AEAEAQRILE SLREPFVVDG LTLEVTASIG LAAISAEDSV
EGLLKGVDLA VMAAKAAGGD RACAYRADME QDMVGRVALA QELREAIRRD EFRIYFEPMV
SLGETGLEIV GQEALIRWEH PQRGLLAPIA FIPFAEETGF IRDIDRWVLR AAAQELARWA
EDPARRHLGV SINISSAQFL SEEFGQMVRE VLDETGVDPT RIELEVTEGT LLSNLGLART
TMMDLRSLGI SIALDDFGTG FSSLSYLRDL PVDVLKIDRS FLGGLSDSKA NRTILEGIIG
LASGLGVALV AEGVETPAQF AWLRAKGCRT FQGYLFGRPV DEAQTQLAPE VSALGGHGGD
RAVSGQIKG
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