| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0331 |
|---|
| Symbol | |
|---|
| ID | 3719091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | - |
|---|
| Start bp | 2057613 |
|---|
| End bp | 2059451 |
|---|
| Gene Length | 1839 bp |
|---|
| Protein Length | 612 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640071543 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_353408 |
|---|
| Protein GI | 77463904 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3405] Endoglucanase Y |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.378113 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAGAC GGACCATCCT GACATCGGCC GCCGCCGCGC TGATGCTGGC CCCTGCAGGA
CGCCTCCTCG CGCAGTCGGG CAGAGAGGCT TTGCCTGCGG ACCACCCGCT CCAGGCGGCC
TGGCGCAGCT GGAAGGATGC GTTCCTGCTG CCCGCCGGCC GCATCGTCGA CGGGCCGCAG
CAGAATGCGA GCCATTCCGA AGGGCAGGGC TACGGAGCCA CGCTCGCCGC GATCTTCGGC
GACGAGGAGG CCCTGCGGCG CATCGTCGAC TGGACCGAGG CGAACCTTGC GCGGCGCGAG
GACAAGCTTC TGAGCTGGCG CTGGCTGCCC GGTGTGGCGC TGGCCGTGCC CGACGAGAAC
AACGCCACCG ACGGCGATCT CTTCTACGCC TGGGGTCTCG CCATGGCCGC GCAGCGGTTC
GGCAAGGCCG ATTACGCCGG GCGGGCGACC GAACTGGCGC GCGCCATCGC GCTGCATTGC
GTGCGTCCGC ATCCGGACGG CTCCGAGCAG CTCGTGCTGC TGCCGGGGGC CAGCGGCTTC
GAGACGCCGG ACGGGGTGGT GCTCAACCCC TCCTACTACA TGCCCCGCGC CCTGACCGAG
CTCGCCGCCT TCAGCGGCCA GGACCGGCTG GCGCGCTGTG CCCGCGACGG GGCGGACTGG
ATCGCGTCGC TCGGGCTTCC GCCGGACTGG GCGCTGGTCA CGCCCTTCGG CACACAGCCG
GCGCCGGGCC TGTCCCACAA CAGCGGCTAC GATGCGCTGC GGGTGCCCCT GTTCCTGCTC
TGGTCCGGGC TGACCGCCAA TCCCGCGCTG CGCCGCGCGG TGGAGGCGGC CGGGGACGCC
GCAGCCGGCG ACACGCCGGT GAGGTTCGAC CGCGACACGG GGGCGGTGCT GGAACGGTCC
GCCGATCCGG GCTTCCGCGC CGTGCTCGCG CTTGGCGATT GCGCCCTTTC GGGTCGTCCG
GGGGCGGCGA TCCCGCCCTT CGACGCGCGC CAACCGGGCG GCGGATGCCG AGCTGCGGCG
CCTCCGCGCG CAGTTTCCCG ACTGGGACGT GCCGTCCGAC CTCACGACGC TGGGCCAGCA
GCGGTCTCCC GCCGCCGAGA TCGACCGGAT CTACCGGCAG ATCGCGGCCG GAGACCTGAC
CGAGGCCCGG CAGGCGATGG ACGAGACGTC GCGCAACTTC CCCGGATGGA CGCCGCCGCC
CGAGATGGAG CGTCTTCTGG CCACGGCCGA GGCACAGGCC GCCTTCGATG CGGCCGCCAG
TGCGGGCAAT GCGGGCGCGG CAATCGAGAT CGCGCGGCGG ACGCCCGCGA TCCTGCGCTG
CGACCGGGTG AACAACGCCT GGCGGCTGGC CGAGCTGCAG GCGGCGGCGG GCCAGAAGGC
GGCCGCGCTG CAGAGCTATC GCGGGGTGAT CGCCTCCTGC TCGGGCCTGT CCGAGGTGAC
GGCGACGCTC GAGAAGGCGG AGGCCGTGGC CAGCGATGCG GAGCTGGTCG AGCTCTTCCG
GCTGGCCAAT GCGCAGCTTC CGGGCTCGGG ACCTGCGCTG AAGGCGCTCG AGACACGGCT
GAGGGCGGGA CGCGGCGACA CGGCGCCCGA GGCATCGGCG CCGGCTGCCG CAGCAACGGG
CGGAGCCAAG CGCACGCCGG GCCGCACTGC GGTGGCCGAG GCGGATCTGC CCGCGGCGGG
GCGCCCGCGC ACTGCGGGCG TGGCGCGCAG CGGCGGAGGG GCGGGGCTGT CCGCGGTCCG
CGCGGCAGCG CAACGCGGCG ACTGGCGGAC CTGCACCGGC CTCACCAGCG GCGCCACCAG
CGCCGACATG CTCTACGAGC GGGCCTGGTG CGTCTATAA
|
|---|
| Protein sequence | MRRRTILTSA AAALMLAPAG RLLAQSGREA LPADHPLQAA WRSWKDAFLL PAGRIVDGPQ
QNASHSEGQG YGATLAAIFG DEEALRRIVD WTEANLARRE DKLLSWRWLP GVALAVPDEN
NATDGDLFYA WGLAMAAQRF GKADYAGRAT ELARAIALHC VRPHPDGSEQ LVLLPGASGF
ETPDGVVLNP SYYMPRALTE LAAFSGQDRL ARCARDGADW IASLGLPPDW ALVTPFGTQP
APGLSHNSGY DALRVPLFLL WSGLTANPAL RRAVEAAGDA AAGDTPVRFD RDTGAVLERS
ADPGFRAVLA LGDCALSGRP GAAIPPFDAR QPGGGCRAAA PPRAVSRLGR AVRPHDAGPA
AVSRRRDRPD LPADRGRRPD RGPAGDGRDV AQLPRMDAAA RDGASSGHGR GTGRLRCGRQ
CGQCGRGNRD RAADARDPAL RPGEQRLAAG RAAGGGGPEG GRAAELSRGD RLLLGPVRGD
GDAREGGGRG QRCGAGRALP AGQCAASGLG TCAEGARDTA EGGTRRHGAR GIGAGCRSNG
RSQAHAGPHC GGRGGSARGG APAHCGRGAQ RRRGGAVRGP RGSATRRLAD LHRPHQRRHQ
RRHALRAGLV RL
|
|---|
| |