| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0282 |
|---|
| Symbol | ppsR |
|---|
| ID | 3719194 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | - |
|---|
| Start bp | 2007910 |
|---|
| End bp | 2009304 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640071491 |
|---|
| Product | transcriptional regulator PpsR |
|---|
| Protein accession | YP_353356 |
|---|
| Protein GI | 77463852 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR02040] transcriptional regulator PpsR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGCCG GCGGGAGCCT CCCGTCCCTC GCTCCGGACC TCGTGCGCGA CCTGATCGCG
ACCGCGGCCG ACATCTCGCT GCTCGTCTCG CAGGAAGGGG TGGTCCGGGA GGTGATGGCC
AACCCGCACC ACCCGAGCTT CGGCCAGCTT TCGGAGTGGG AGGGTCGCCC GCTCGAGGAA
GTGCTGACCG CCGAGAGCGT CGCCAAGTTC CGCCTGCGCA GCGAGGGGCT TGAACCCGGC
CGCGGATCGG TCGCGGTCGA GCTGAACCAC ATCGATCCGC GCAGCTTCGA GTTTCCGATC
CGCTACATCC TGCACCGCCT GCCGGCCGAC CGCTCGATCC TGATGCTCGG GCGCGACCTG
CGCCCCATCG CAGAGGTGCA GCAGCAGCTG GTCGCGGCGC AGCTTGCGAT GGAACGCGAC
TACGAGACCC AGCGCGAGAT GGAGACCCGC TACCGCGTGG TGCTCGACGT GTCGCGCGAT
CCGATGGTGC TCGTCTCGAT GTCCACCGGG CGGATCGTCG ATCTGAACAG CGCGGCGGGG
CTCTTGCTCG GCGGCGTGCG CCAGGACCTG CTGGGCGCGG CCATCGCGCA GGAGTTCGAG
GGACGGCGGC GCGGCGAGTT CATGGAGACG ATGACCAATC TCGCGGCGAC CGAAAGTGCT
GCGCCGGTCG AGGTGCTGGC GCGGCGGTCG CAGAAGCGGC TTCTGGTGGT GCCGCGTGTC
TTCCGCGCGG CGGGCGAGCG GCTGCTCCTG TGCCAGATCG ACCCGGCCGA TGCGACGCAG
CCGGTGGGCG ACGAGCTGTC CGAGAACCTC GCCCGGCTCT ATCACGAGGG GGTGGACGGA
ATCGTCTTCT CCGATGCCGA CGGCACGATC CGGGGCGCCA ACGAGGCCTT CCTCAACATG
ACCGACTCGT CGAGCCTCGC CGCGATCCGC GGCCGCTCGA TCGCCGATTT CCTCGCCCGC
GGCAGCGTCG ACCTGCGCGT GCTGATCGAC AGTGTCAGAC GCACTGGACA ACTGCGGCTC
TATGCCACCC GACTCACCAC CGACTTCGCG GGGCAGATTG CCGCAGAGAT CTCGGCCACC
TGGCTCGATG ACCGCGAGCG CCCGCTGCTC GTTCTTGTCG TGCGGGACAC GAGCCGGGCC
GACACGATGC GCAGGCCCGT GCCCGCGACG GGCGTGATCG ACGAGCCCGC CCGCAATGTT
ATGGAGCTGG TCGGGAATTC CACCCTCAAG GACATCGTTG CGGAAACCAC TGATGTTGTT
GAGAAAATGT GCATCGAGAC GGCACTGGAG CTGACGCGGA ACAACCGCGT GGCCGCGGCC
GAGATGCTCT CGCTGTCGCG GCAGTCGCTT TATGTGAAGC TGCGCAAGTT CGGCCTCCTG
AACAAGGACG AGTGA
|
|---|
| Protein sequence | MLAGGSLPSL APDLVRDLIA TAADISLLVS QEGVVREVMA NPHHPSFGQL SEWEGRPLEE
VLTAESVAKF RLRSEGLEPG RGSVAVELNH IDPRSFEFPI RYILHRLPAD RSILMLGRDL
RPIAEVQQQL VAAQLAMERD YETQREMETR YRVVLDVSRD PMVLVSMSTG RIVDLNSAAG
LLLGGVRQDL LGAAIAQEFE GRRRGEFMET MTNLAATESA APVEVLARRS QKRLLVVPRV
FRAAGERLLL CQIDPADATQ PVGDELSENL ARLYHEGVDG IVFSDADGTI RGANEAFLNM
TDSSSLAAIR GRSIADFLAR GSVDLRVLID SVRRTGQLRL YATRLTTDFA GQIAAEISAT
WLDDRERPLL VLVVRDTSRA DTMRRPVPAT GVIDEPARNV MELVGNSTLK DIVAETTDVV
EKMCIETALE LTRNNRVAAA EMLSLSRQSL YVKLRKFGLL NKDE
|
|---|
| |